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13_1_40cm_scaffold_2075

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2075_1
unknown

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1..99
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_scaffold_2075_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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178..2238
DNA (2061bp) protein (687aa)
TonB-dependent receptor, possible Cobalamin transporter n=1 Tax=Candidatus Nitrospira defluvii PF18_9BACT">RepID=D8PF18_9BACT
putative TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tonB-dependent receptor, possible Cobalamin transporter
13_1_40cm_scaffold_2075_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2283..3029
DNA (747bp) protein (249aa)
Methyltransferase id=4213634 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative methyltransferase type 11 Tax=GWA2_Rokubacteria_73_35_curated
putative methyltransferase type 11
13_1_40cm_scaffold_2075_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3069..4061
DNA (993bp) protein (331aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWA2_Rokubacteria_73_35_curated
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase id=4213632 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2075_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4074..4862
DNA (789bp) protein (263aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4213630 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_2075_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4925..6541
DNA (1617bp) protein (539aa)
putative regulatory protein Tax=GWA2_Rokubacteria_73_35_curated
Urea amidolyase related protein id=2908216 bin=GWB1_Spirochaetales_60_80 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
allophanate hydrolase
13_1_40cm_scaffold_2075_7
GWC2_Methylomirabilis_70_24, GWC2_Methylomirabilis_70_24, GWC2_Methylomirabilis_70_24, GWC2_Methylomirabilis_70_24, Methylomirabilis, Bacteria

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comp(6765..6959)
DNA (195bp) protein (65aa)
id=4543817 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4543817 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_2075_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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7205..7765
DNA (561bp) protein (187aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] id=14628094 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
glutamate-1-semialdehyde aminotransferase
13_1_40cm_scaffold_2075_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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7771..8559
DNA (789bp) protein (263aa)
Lactam utilization-like protein (lamB); K07160 UPF0271 protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Lactam utilization-like protein (lamB); K07160 UPF0271 protein id=14628095 bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
LamB/YcsF family protein
13_1_40cm_scaffold_2075_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8576..9691
DNA (1116bp) protein (372aa)
gcvT; glycine cleavage system aminomethyltransferase T; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=GWA2_Rokubacteria_73_35_curated
Aminomethyltransferase id=4193474 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycine cleavage system protein T
13_1_40cm_scaffold_2075_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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9749..10141
DNA (393bp) protein (131aa)
glycine cleavage system protein H id=4193475 bin=GWA2_Methylomirabilis_73_35 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycine cleavage system protein H; K02437 glycine cleavage system H protein Tax=GWA2_Rokubacteria_73_35_curated
glycine cleavage system H protein
13_1_40cm_scaffold_2075_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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10141..11484
DNA (1344bp) protein (448aa)
gcvPA; GcvPA; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=GWA2_Rokubacteria_73_35_curated
protein GcvPA; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] id=14628076 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
13_1_40cm_scaffold_2075_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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11484..12956
DNA (1473bp) protein (491aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] id=14628075 bin=bin7_NC10_sister species=Geobacillus sp. GHH01 genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=CSP1_6_Rokubacteria
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
13_1_40cm_scaffold_2075_14
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13102..13572)
DNA (471bp) protein (157aa)
Cupin region n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GV5_POLSJ
hypothetical protein
Cupin region {ECO:0000313|EMBL:ABE42237.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas s
13_1_40cm_scaffold_2075_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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13844..14644
DNA (801bp) protein (267aa)
lipoate protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Octanoyltransferase LipM id=5020377 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
biotin/lipoate A/B protein ligase
13_1_40cm_scaffold_2075_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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14669..15109
DNA (441bp) protein (147aa)
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX family hydrolase id=5020378 bin=GWA2_Methylomirabilis_73_35 species=Thermoproteus tenax genus=Thermoproteus taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX family hydrolase
13_1_40cm_scaffold_2075_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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15132..16619
DNA (1488bp) protein (496aa)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pepA; leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase id=5020379 bin=GWA2_Methylomirabilis_73_35 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2075_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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16616..17461
DNA (846bp) protein (282aa)
PHP domain protein id=5020380 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PHP domain-containing protein; K07053 Tax=GWA2_Rokubacteria_73_35_curated
PHP domain-containing protein
13_1_40cm_scaffold_2075_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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17458..17682
DNA (225bp) protein (75aa)
ArsC family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ArsC family protein id=5020381 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arsenate reductase like protein
Displaying 19 items

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