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13_1_40cm_scaffold_2295

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2295_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..755)
DNA (753bp) protein (251aa)
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein id=3362766 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldehyde oxidase/xanthine dehydrogenase
13_1_40cm_scaffold_2295_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(752..1231)
DNA (480bp) protein (160aa)
carbon monoxide dehydrogenase small chain; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) (EC:1.2.99.2)
Carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4R2_THERP
13_1_40cm_scaffold_2295_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2003..2446)
DNA (444bp) protein (148aa)
putative hydrolase; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] id=14631754 bin=bin9_gal15 species=Novosphingobium pentaromativorans genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
amidohydrolase 2 Tax=GWA2_Rokubacteria_73_35_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
13_1_40cm_scaffold_2295_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2482..3012)
DNA (531bp) protein (177aa)
amidohydrolase 2 Tax=GWA2_Rokubacteria_73_35_curated
Putative TIM-barrel fold metal-dependent hydrolase id=3033638 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 2
13_1_40cm_scaffold_2295_5
unknown

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comp(3026..3274)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_scaffold_2295_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3284..4219
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003644B8B
extracellular solute-binding protein Tax=RBG_16_Betaproteobacteria_64_18_curated
NMT1-like family protein
13_1_40cm_scaffold_2295_7
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(4226..5224)
DNA (999bp) protein (333aa)
ABC transporter substrate-binding protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WZU3_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component Tax=RBG_16_Armatimonadetes_67_12_curated
ABC transporter substrate-binding protein
13_1_40cm_scaffold_2295_8
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

5297..6076
DNA (780bp) protein (260aa)
ABC transporter (EC:3.6.3.25); K02049 NitT/TauT family transport system ATP-binding protein Tax=RBG_16_Armatimonadetes_67_12_curated
ABC transporter related protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5P2_METTP
ABC transporter related
13_1_40cm_scaffold_2295_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6073..6822
DNA (750bp) protein (250aa)
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein id=14625732 bin=bin7_NC10_sister species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_2295_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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7438..8580
DNA (1143bp) protein (381aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=14625979 bin=bin7_NC10_sister species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=CSP1_6_Rokubacteria
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
13_1_40cm_scaffold_2295_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

8568..9548
DNA (981bp) protein (327aa)
transketolase, central region; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] id=14625978 bin=bin7_NC10_sister species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
transketolase, central region; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=CSP1_6_Rokubacteria
transketolase, central region
13_1_40cm_scaffold_2295_12
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9658..10479)
DNA (822bp) protein (274aa)
protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG61461.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legione
13_1_40cm_scaffold_2295_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10603..10827
DNA (225bp) protein (75aa)
Putative uncharacterized protein id=2432321 bin=GWA2_Methylomirabilis_73_35 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_2295_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10781..11131
DNA (351bp) protein (117aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=14631671 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_scaffold_2295_15
Halomonas titanicae, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11214..12476)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Halomonas titanicae BH1 RepID=L9UA88_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ELY21163.1}; TaxID=1204738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas titanicae
13_1_40cm_scaffold_2295_16
unknown

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comp(12558..13211)
DNA (654bp) protein (218aa)

This feature has no annotations

13_1_40cm_scaffold_2295_17
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(13335..14093)
DNA (759bp) protein (253aa)
Pentapeptide repeat protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HXG2_CYAP4
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:ACL46507.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 /
13_1_40cm_scaffold_2295_18
unknown

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comp(14235..14360)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_2295_19

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comp(15220..15582)
DNA (363bp) protein (121aa)
Marine sediment metagenome DNA, contig: S03H2_C00503 {ECO:0000313|EMBL:GAH21452.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 19 items

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