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13_1_40cm_scaffold_337

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_337_1
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(3..974)
DNA (972bp) protein (324aa)
Putative dehydrogenase protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZG0_THERP
dehydrogenase
Putative dehydrogenase protein {ECO:0000313|EMBL:ACM05184.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (str
13_1_40cm_scaffold_337_2
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1331..2644
DNA (1314bp) protein (438aa)
Thiol oxidoreductase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022G6_SOLUE
thiol oxidoreductase-like protein Tax=RBG_16_Gamma2_60_9_curated
thiol oxidoreductase-like protein
13_1_40cm_scaffold_337_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(2678..3265)
DNA (588bp) protein (196aa)
Putative aminomethyltransferase protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYI4_THERP
putative aminomethyltransferase protein
Putative aminomethyltransferase protein {ECO:0000313|EMBL:ACM05758.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium ro
13_1_40cm_scaffold_337_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3287..4357)
DNA (1071bp) protein (357aa)
GdhA3; glutamate dehydrogenase/leucine dehydrogenase; K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=GWA2_Rokubacteria_70_23_curated
UPI0003D6644F related cluster n=1 Tax=unknown RepID=UPI0003D6644F
leucine dehydrogenase
13_1_40cm_scaffold_337_5
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4375..5136)
DNA (762bp) protein (254aa)
UPI0003D5E210 related cluster n=1 Tax=unknown RepID=UPI0003D5E210
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ETI69033.1}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_337_6
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5181..5888)
DNA (708bp) protein (236aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W7F0_9CYAN
amino acid ABC transporter ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:AFZ16133.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;
13_1_40cm_scaffold_337_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5881..7896)
DNA (2016bp) protein (672aa)
ABC transporter n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000369D95D
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC46380.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
branched-chain amino acid ABC transporter permease/ATP-binding protein
13_1_40cm_scaffold_337_8
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7900..8838)
DNA (939bp) protein (313aa)
Inner-membrane translocator n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FZT8_9CYAN
Inner-membrane translocator {ECO:0000313|EMBL:CBN55878.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
inner-membrane translocator
13_1_40cm_scaffold_337_9
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(8886..10112)
DNA (1227bp) protein (409aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Calothrix sp. PCC 6303 RepID=K9VAY4_9CYAN
amino acid ABC transporter substrate-binding protein
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AFZ04405.1}; Flags: Precursor;; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Cal
13_1_40cm_scaffold_337_10
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10376..12343
DNA (1968bp) protein (656aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003649073
N-methylproline demethylase {ECO:0000313|EMBL:KHJ56160.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamir
NADH:flavin oxidoreductase
13_1_40cm_scaffold_337_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12396..13229
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Nocardiopsis alkaliphila RepID=UPI00034B93A6
Uncharacterized protein {ECO:0000313|EMBL:ETW94587.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_scaffold_337_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13266..15290
DNA (2025bp) protein (675aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_73_35_curated
Hydantoin utilization protein id=4975504 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hydantoin utilization protein
13_1_40cm_scaffold_337_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15287..16918
DNA (1632bp) protein (544aa)
Putative N-methylhydantoinase B id=4534456 bin=GWF2_Methylomirabilis_70_14 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative N-methylhydantoinase B Tax=GWA2_Rokubacteria_73_35_curated
putative N-methylhydantoinase B
13_1_40cm_scaffold_337_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16939..17703
DNA (765bp) protein (255aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-ketoacyl-(Acyl-carrier-protein) reductase id=4975506 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
13_1_40cm_scaffold_337_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17734..18783)
DNA (1050bp) protein (350aa)
IS630 family transposase n=1 Tax=Rhodococcus opacus M213 RepID=K8XLC6_RHOOP
IS630 family transposase {ECO:0000313|EMBL:EKT79052.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
putative transposase
13_1_40cm_scaffold_337_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19090..19953
DNA (864bp) protein (288aa)
FAD binding domain in molybdopterin dehydrogenase id=4975507 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
(2Fe-2S)-binding domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
molybdopterin dehydrogenase FAD-binding protein
13_1_40cm_scaffold_337_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19950..20420
DNA (471bp) protein (157aa)
FAD binding domain in molybdopterin dehydrogenase id=4975507 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
(2Fe-2S)-binding domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
2Fe-2S iron-sulfur cluster binding domain-containing protein
13_1_40cm_scaffold_337_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20413..22710
DNA (2298bp) protein (766aa)
aldehyde oxidase (EC:1.17.1.4) Tax=GWA2_Rokubacteria_73_35_curated
aldehyde oxidase (EC:1.17.1.4)
Probable aldehyde oxidase and xanthine dehydrogenase family protein transmembrane id=4975508 bin=GWA2_Methylomirabilis_73_35 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_337_19
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22929..24494
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000366AD8E
BNR/Asp-box repeat-containing protein
BNR/Asp-box repeat-containing protein {ECO:0000313|EMBL:ADG19831.1}; Flags: Precursor;; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholde
13_1_40cm_scaffold_337_20
unknown

Not on your lists

comp(24778..24918)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_scaffold_337_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(25083..25733)
DNA (651bp) protein (217aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] id=14625693 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
13_1_40cm_scaffold_337_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(25734..27071)
DNA (1338bp) protein (446aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Acetyl-CoA carboxylase, biotin carboxylase id=4614181 bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA carboxylase, biotin carboxylase
13_1_40cm_scaffold_337_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(27080..28351)
DNA (1272bp) protein (424aa)
peptidase M, neutral zinc metallopeptidase, zinc-binding site Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tetratricopeptide TPR_2 repeat protein id=4973965 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TPR repeat-containing protein
13_1_40cm_scaffold_337_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(28361..28834)
DNA (474bp) protein (158aa)
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=GWA2_Rokubacteria_73_35_curated
accB; acetyl Coa carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein id=14625690 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase, biotin carboxyl carrier protein
13_1_40cm_scaffold_337_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(28834..29403)
DNA (570bp) protein (190aa)
elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Elongation factor P id=4614254 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
translation elongation factor P
13_1_40cm_scaffold_337_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(29410..30039)
DNA (630bp) protein (210aa)
TPR domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tetratricopeptide domain protein id=4614255 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TPR domain-containing protein
13_1_40cm_scaffold_337_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(30084..31166)
DNA (1083bp) protein (361aa)
3-dehydroquinate synthase (EC:4.2.3.4) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase id=4614256 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_337_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(31182..32357)
DNA (1176bp) protein (392aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] id=14625686 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
aroC; chorismate synthase
13_1_40cm_scaffold_337_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(32434..34635)
DNA (2202bp) protein (734aa)
Uncharacterized protein id=4614258 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
type IV pilus secretin PilQ
13_1_40cm_scaffold_337_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(34635..35114)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=14625684 bin=bin7_NC10_sister species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Displaying items 1-30 of 42 in total

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