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13_1_40cm_scaffold_3478

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3478_1
unknown

Not on your lists

comp(3..248)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_3478_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(630..848)
DNA (219bp) protein (73aa)
peptide ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=4775217 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_3478_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(836..2131)
DNA (1296bp) protein (432aa)
ABC transporter peptide-binding protein id=3884414 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
peptide ABC transporter substrate-binding protein
13_1_40cm_scaffold_3478_4
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2128..2490)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000378EEDC
putative membrane associated protein
Putative membrane associated protein {ECO:0000313|EMBL:AEV35403.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseu
13_1_40cm_scaffold_3478_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2639..3658
DNA (1020bp) protein (340aa)
iron ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Candidate ABC type Fe3+ transport system, periplasmic component id=1901315 bin=GWD2_Deltaproteobacteria_55_8 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
iron ABC transporter substrate-binding protein
13_1_40cm_scaffold_3478_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3704..4408
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI00037269C5
isochorismatase hydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hydrolase
13_1_40cm_scaffold_3478_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4501..5772
DNA (1272bp) protein (424aa)
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Amino acid/amide ABC transporter substrate-binding protein, HAAT family id=3239112 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter substrate-binding protein, HAAT family
13_1_40cm_scaffold_3478_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5814..6671
DNA (858bp) protein (286aa)
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=3238917 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter membrane protein 1, HAAT family
13_1_40cm_scaffold_3478_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6725..7651
DNA (927bp) protein (309aa)
amino acid/amide ABC transporter membrane protein 2, HAAT family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Amino acid/amide ABC transporter membrane protein 2, HAAT family id=3238915 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter membrane protein 2, HAAT family
13_1_40cm_scaffold_3478_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7656..8420
DNA (765bp) protein (255aa)
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=3238913 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
13_1_40cm_scaffold_3478_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8417..9118
DNA (702bp) protein (234aa)
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=3238911 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
13_1_40cm_scaffold_3478_12
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(9125..10192)
DNA (1068bp) protein (356aa)
biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
biotin synthase (EC:2.8.1.6)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0003198A90
13_1_40cm_scaffold_3478_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10286..10651)
DNA (366bp) protein (122aa)
hypothetical protein id=4279015 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_3478_14
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(11729..12583)
DNA (855bp) protein (285aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=CG_Dehalo_01
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Chloroflexus RepID=PANB_CHLAA
Displaying 14 items

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