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13_1_40cm_scaffold_550

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_550_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1..402
DNA (402bp) protein (134aa)
peptidase M28 id=14626954 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
peptidase M28 Tax=CSP1_6_Rokubacteria
peptidase M28
13_1_40cm_scaffold_550_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

402..1508
DNA (1107bp) protein (369aa)
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
periplasmic component of the Tol biopolymer transport system id=14626953 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
periplasmic component of the Tol biopolymer transport system
13_1_40cm_scaffold_550_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1604..2062
DNA (459bp) protein (153aa)
id=4143380 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_550_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2202..3743)
DNA (1542bp) protein (514aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide ABC transporter substrate-binding protein
13_1_40cm_scaffold_550_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3778..4680)
DNA (903bp) protein (301aa)
Putative peptide ABC transporter permease protein n=1 Tax=uncultured marine bacterium MedDCM-OCT-S11-C95 RepID=D6PE72_9BACT
Diguanylate cyclase {ECO:0000313|EMBL:ETX08944.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
glutathione transport system permease GsiD
13_1_40cm_scaffold_550_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4820..5776)
DNA (957bp) protein (319aa)
Peptide ABC transporter permease {ECO:0000313|EMBL:ETX08943.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. T
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein id=14431362 bin=bin3_NC10 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
dipeptide transport system permease DppB
13_1_40cm_scaffold_550_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5784..7403)
DNA (1620bp) protein (540aa)
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter substrate-binding protein id=14431361 bin=bin3_NC10 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
ABC transporter substrate-binding protein
13_1_40cm_scaffold_550_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7430..7702)
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Extracellular solute-binding protein family 5 id=4793584 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_550_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8282..8716
DNA (435bp) protein (145aa)
Putative uncharacterized protein id=1904680 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. WH 5701 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_550_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9040..9174
DNA (135bp) protein (45aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
RES domain protein id=1904677 bin=GWA2_Methylomirabilis_73_35 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_550_11
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(9195..9899)
DNA (705bp) protein (235aa)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C (EC:1.3.3.11)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C {ECO:0000313|EMBL:CCW35737.1}; EC=1.3.3.11 {ECO:0000313|EMBL:CCW35737.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonad
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZE9_9BACT
13_1_40cm_scaffold_550_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10049..11650
DNA (1602bp) protein (534aa)
family 5 extracellular solute-binding protein (EC:3.1.3.26); K02035 peptide/nickel transport system substrate-binding protein id=14625072 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
family 5 extracellular solute-binding protein (EC:3.1.3.26); K02035 peptide/nickel transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
family 5 extracellular solute-binding protein (EC:3.1.3.26)
13_1_40cm_scaffold_550_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11846..12832
DNA (987bp) protein (329aa)
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02033 peptide/nickel transport system permease protein id=14625071 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24)
13_1_40cm_scaffold_550_14
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

12849..13676
DNA (828bp) protein (276aa)
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02034 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02034 peptide/nickel transport system permease protein id=14625070 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24)
13_1_40cm_scaffold_550_15
unknown

Not on your lists

13845..14057
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_550_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14079..14972)
DNA (894bp) protein (298aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=GWA2_Rokubacteria_73_35_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_550_17
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15004..18264)
DNA (3261bp) protein (1087aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNC0_AZOSU
Uncharacterized protein {ECO:0000313|EMBL:KAK45295.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jian
hypothetical protein
13_1_40cm_scaffold_550_18
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18264..19835)
DNA (1572bp) protein (524aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
13_1_40cm_scaffold_550_19
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19854..20690)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036B24DF
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_550_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20687..21604)
DNA (918bp) protein (306aa)
appB; ABC-type transporter, permease component: PepT family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Dipeptide transport system permease DppB id=4948701 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
h16_A2950; ABC transporter permease
13_1_40cm_scaffold_550_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21705..21950)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_550_22
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22132..22674)
DNA (543bp) protein (181aa)
Tax=RBG_13_Deltaproteobacteria_65_10_curated
13_1_40cm_scaffold_550_23
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22905..23801
DNA (897bp) protein (299aa)
Gamma-glutamyltranspeptidase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS51_9BURK
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:EHR72848.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium
hypothetical protein
13_1_40cm_scaffold_550_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23833..24717
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003813F09
ABC-type transport system periplasmic substrate-binding protein (probable substrate sulfonate/nitrate/taurine) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
13_1_40cm_scaffold_550_25
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24714..25700
DNA (987bp) protein (329aa)
immunogenic protein precursor n=1 Tax=Bradyrhizobium japonicum RepID=UPI000375C4A1
Immunogenic protein {ECO:0000313|EMBL:EJZ30760.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CC
immunogenic protein precursor
13_1_40cm_scaffold_550_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25712..26713
DNA (1002bp) protein (334aa)
Aldo/keto reductase id=4911286 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldo/keto reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative aldoketoreductase
13_1_40cm_scaffold_550_27
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(26746..27108)
DNA (363bp) protein (121aa)
hypothetical protein, partial n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036892EA
3-oxoacyl-ACP reductase Tax=RBG_16_NC10_65_8_curated
3-oxoacyl-ACP reductase
13_1_40cm_scaffold_550_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(27127..28221)
DNA (1095bp) protein (365aa)
id=4695023 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4695023 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_550_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

28365..28673
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_scaffold_550_30
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(28677..29204)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1F4_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38071.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
Displaying items 1-30 of 44 in total

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