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13_1_40cm_scaffold_652

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_652_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..148
DNA (147bp) protein (49aa)
amidase, hydantoinase/carbamoylase family (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] Tax=GWA2_Rokubacteria_73_35_curated
Amidase, hydantoinase/carbamoylase family id=3733098 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_652_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

178..837
DNA (660bp) protein (220aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2338868 bin=GWA2_Methylomirabilis_73_35 species=Campylobacter coli genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_652_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

846..1124
DNA (279bp) protein (93aa)
id=14627955 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
id=14627955 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_scaffold_652_4
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1151..1759
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002E5E425
polysaccharide deacetylase Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_scaffold_652_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

1756..2466
DNA (711bp) protein (237aa)
type 11 methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_13_Acidobacteria_68_16_curated
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYJ6_9PROT
type 11 methyltransferase
13_1_40cm_scaffold_652_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2471..3229)
DNA (759bp) protein (253aa)
endonuclease/exonuclease/phosphatase family protein; K06896 Tax=GWA2_Rokubacteria_73_35_curated
Endonuclease/exonuclease/phosphatase id=3733096 bin=GWA2_Methylomirabilis_73_35 species=Herbaspirillum frisingense genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ybhP; endonuclease/exonuclease/phosphatase
13_1_40cm_scaffold_652_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3236..4864)
DNA (1629bp) protein (543aa)
type I phosphodiesterase/nucleotide pyrophosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Endonuclease/exonuclease/phosphatase id=3733094 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
endonuclease/exonuclease/phosphatase
13_1_40cm_scaffold_652_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4895..7117
DNA (2223bp) protein (741aa)
Isovaleryl-CoA dehydrogenase (EC:1.3.99.10) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Isovaleryl-CoA dehydrogenase id=2696015 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase, N-terminal domain protein
13_1_40cm_scaffold_652_9
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7117..7554
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002FD8175
hypothetical protein Tax=GWC1_Azotobacter_66_9_curated
Hypothetical protein
13_1_40cm_scaffold_652_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7563..8045
DNA (483bp) protein (161aa)
MaoC domain protein dehydratase id=3733090 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MaoC domain-containing protein dehydratase Tax=GWA2_Rokubacteria_73_35_curated
MaoC domain-containing protein dehydratase
13_1_40cm_scaffold_652_11
unknown

Not on your lists

8042..8158
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_scaffold_652_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8155..9378
DNA (1224bp) protein (408aa)
formyl-CoA transferase Tax=GWA2_Rokubacteria_73_35_curated
L-carnitine dehydratase/bile acid-inducible protein F id=2696013 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces sp. AA4 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CAIB/BAIF family protein
13_1_40cm_scaffold_652_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9392..10426
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036B29D9
SMP-30/gluconolaconase/LRE domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SMP-30/gluconolaconase/LRE domain-containing protein
13_1_40cm_scaffold_652_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10527..10814
DNA (288bp) protein (96aa)
clpS; ATP-dependent Clp protease adaptor protein clpS Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP-dependent Clp protease adaptor protein ClpS id=3733080 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
clpS; ATP-dependent Clp protease adaptor protein clpS
13_1_40cm_scaffold_652_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10843..11361
DNA (519bp) protein (173aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2315336 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_652_16
unknown

Not on your lists

11501..12028
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_scaffold_652_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12060..12791)
DNA (732bp) protein (244aa)
Altronate dehydratase (EC:4.2.1.7) Tax=GWA2_Rokubacteria_70_23_curated
D-galactarate dehydratase/altronate hydrolase-like protein id=2696008 bin=GWC2_Methylomirabilis_70_16 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uxaA; altronate hydrolase
13_1_40cm_scaffold_652_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12809..13708)
DNA (900bp) protein (300aa)
czcD; cation efflux system protein czcD; K03295 cation efflux system protein, CDF family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cobalt-zinc-cadmium resistance protein CzcD id=2973321 bin=GWF2_Methylomirabilis_70_14 species=Mesorhizobium sp. STM 4661 genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
czcD; cation efflux system protein czcD
13_1_40cm_scaffold_652_19
unknown

Not on your lists

13776..14495
DNA (720bp) protein (240aa)

This feature has no annotations

13_1_40cm_scaffold_652_20
unknown

Not on your lists

comp(14316..15119)
DNA (804bp) protein (268aa)

This feature has no annotations

13_1_40cm_scaffold_652_21
unknown

Not on your lists

comp(15125..15502)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_scaffold_652_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15514..16935)
DNA (1422bp) protein (474aa)
Serine protease do-like (EC:3.4.21.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Serine protease do-like (EC:3.4.21.-)
Putative Serine protease do-like n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMR6_9BACT
13_1_40cm_scaffold_652_23
Synechococcus sp. RS9916, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16932..17618)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037F91EE
TPR repeat {ECO:0000313|EMBL:EAU72729.1}; TaxID=221359 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. RS9916.;"
hypothetical protein
13_1_40cm_scaffold_652_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17699..17899)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_652_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17928..18158)
DNA (231bp) protein (77aa)
manganese and iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Superoxide dismutase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKQ3_THEYD
superoxide dismutase
13_1_40cm_scaffold_652_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18271..19674)
DNA (1404bp) protein (468aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJT7_SYNFM
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
integral membrane sensor signal transduction histidine kinase
13_1_40cm_scaffold_652_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19671..20348)
DNA (678bp) protein (226aa)
Heavy metal response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA26_9BACT
cztR; heavy metal response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cztR; heavy metal response regulator
13_1_40cm_scaffold_652_28
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(20571..21215)
DNA (645bp) protein (215aa)
hypothetical protein; K07147 Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Molybdopterin binding protein id=4181315 bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium F25-01 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_652_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

21334..22101
DNA (768bp) protein (256aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627875 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_652_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22157..22609)
DNA (453bp) protein (151aa)
DoxX family protein id=3830283 bin=GWA2_Methylomirabilis_73_35 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
DoxX family protein
Displaying items 1-30 of 40 in total

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