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13_1_40cm_scaffold_919

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_919_1
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2881
DNA (2880bp) protein (960aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VUX5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU14470.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
13_1_40cm_scaffold_919_2
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2940..4997
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VUX5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU14470.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
13_1_40cm_scaffold_919_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5047..5433)
DNA (387bp) protein (129aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Pseudomonas sp. GM67 RepID=J3H4X1_9PSED
ABC transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter ATP-binding protein
13_1_40cm_scaffold_919_4
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(5529..6299)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Selaginella moellendorffii RepID=D8QX09_SELML
hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
MIP family channel protein
13_1_40cm_scaffold_919_5
unknown

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6383..6565
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_scaffold_919_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6475..6975)
DNA (501bp) protein (167aa)
OmpA/MotB domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Peptidoglycan-associated lipoprotein id=2546000 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
outer membrane lipoprotein omp16
13_1_40cm_scaffold_919_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7230..8186
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D0251
cyclase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cyclase
13_1_40cm_scaffold_919_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8274..9107
DNA (834bp) protein (278aa)
extradiol ring-cleavage dioxygenase class III protein subunit B; K05713 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Extradiol ring-cleavage dioxygenase class III protein subunit B id=4911279 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extradiol ring-cleavage dioxygenase class III protein subunit B
13_1_40cm_scaffold_919_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9104..9316
DNA (213bp) protein (71aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4911278 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_919_10
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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9404..9802
DNA (399bp) protein (133aa)
Putative Histidine kinase id=3667496 bin=GWA2_Elusimicrobia_69_24 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
PAS domain-containing protein Tax=GWA2_Elusimicrobia_69_24_curated
two-component hybrid sensor and regulator
13_1_40cm_scaffold_919_11
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

9849..10265
DNA (417bp) protein (139aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3) Tax=GWA2_Elusimicrobia_69_24_curated
Putative Histidine kinase id=2307890 bin=GWA2_Elusimicrobia_69_24 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
two-component hybrid sensor and regulator
13_1_40cm_scaffold_919_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10281..11213)
DNA (933bp) protein (311aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Inner-membrane translocator id=4646463 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
13_1_40cm_scaffold_919_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11210..12076)
DNA (867bp) protein (289aa)
ABC-type transporter, integral membrane subunit id=4646461 bin=GWA2_Methylomirabilis_73_35 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter integral membrane subunit; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter
13_1_40cm_scaffold_919_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12076..12786)
DNA (711bp) protein (237aa)
Salicylaldehyde dehydrogenase (Modular protein) id=4646459 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Fe(3+)-transporting ATPase
13_1_40cm_scaffold_919_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12779..13519)
DNA (741bp) protein (247aa)
ABC transporter related id=4646457 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter-like protein
13_1_40cm_scaffold_919_16
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13529..13996)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003821287
Uncharacterized protein {ECO:0000313|EMBL:KJS35387.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_
hydroxylaminobenzene mutase
13_1_40cm_scaffold_919_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14011..15192)
DNA (1182bp) protein (394aa)
Putative uncharacterized protein id=4646454 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. ORS 375 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
extracellular ligand-binding receptor
13_1_40cm_scaffold_919_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15218..16303)
DNA (1086bp) protein (362aa)
putative methionine synthase, vitamin-B12 independent (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_
Methionine synthase vitamin-B12 independent n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8T5_SPHTD
methionine synthase vitamin-B12 independent
13_1_40cm_scaffold_919_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16315..17532)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI0003709837
dipeptidyl aminopeptidase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
dipeptidyl aminopeptidase
13_1_40cm_scaffold_919_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17673..19454
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAV4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40363.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_scaffold_919_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

19607..20731
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00037731B2
FMN-dependent alpha-hydroxy acid dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
FMN-dependent alpha-hydroxy acid dehydrogenase
13_1_40cm_scaffold_919_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20789..21814)
DNA (1026bp) protein (342aa)
qor1; NADPH:quinone reductase (EC:1.6.5.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Zn-dependent alcohol dehydrogenases id=4202594 bin=GWC2_Methylomirabilis_70_16 species=uncultured nuHF2 cluster bacterium HF0770_42C12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NADPH:quinone oxidoreductase
13_1_40cm_scaffold_919_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21825..22820)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003644B8B
extracellular solute-binding protein Tax=RBG_16_Betaproteobacteria_64_18_curated
NMT1-like family protein
13_1_40cm_scaffold_919_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22817..25162)
DNA (2346bp) protein (782aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding id=1863209 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
carbon-monoxide dehydrogenase large subunit, coxL-like protein
13_1_40cm_scaffold_919_25
unknown

Not on your lists

comp(25831..25956)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_919_26
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26049..27293
DNA (1245bp) protein (415aa)
Carbohydrate-binding and sugar hydrolysis n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBF7_NITWC
hypothetical protein Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
carbohydrate-binding protein
13_1_40cm_scaffold_919_27
CSP1_5_NC10, NC10, Bacteria

Not on your lists

27290..27556
DNA (267bp) protein (89aa)
Putative uncharacterized protein id=3785165 bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=CSP1_5_NC10
Displaying 27 items

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