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13_1_40cm_scaffold_9748

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_9748_1
unknown

Not on your lists

56..337
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_scaffold_9748_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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358..723
DNA (366bp) protein (122aa)
id=14626280 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_9748_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(779..1822)
DNA (1044bp) protein (348aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQZ3_9BACT
Kelch repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Kelch repeat-containing protein
13_1_40cm_scaffold_9748_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1819..2775)
DNA (957bp) protein (319aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oxidoreductase family protein id=4827670 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase
13_1_40cm_scaffold_9748_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3452..3856)
DNA (405bp) protein (135aa)
Acetoacetate metabolism regulatory protein AtoC n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJM8_SORCE
acetoacetate metabolism regulatory protein AtoC
Acetoacetate metabolism regulatory protein AtoC {ECO:0000313|EMBL:AGP32721.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangiu
13_1_40cm_scaffold_9748_6
unknown

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comp(3853..4119)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_scaffold_9748_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4275..5690)
DNA (1416bp) protein (472aa)
putative UDP-N-acetylmuramate-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RBG_16_RIF_WS3X_71_46_curated
UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0C4_9BACT id=5223295 bin=16ft_combo_ws3_JS1 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_scaffold_9748_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5878..8277
DNA (2400bp) protein (800aa)
GAF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2306500 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF domain-containing protein
13_1_40cm_scaffold_9748_9
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8288..9451)
DNA (1164bp) protein (388aa)
3-carboxy-cis,cis-muconate lactonizing enzyme n=1 Tax=Bradyrhizobium japonicum RepID=UPI000379185C
3-carboxy-cis,cis-muconate lactonizing enzyme {ECO:0000313|EMBL:EJN08733.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Br
hypothetical protein
13_1_40cm_scaffold_9748_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9541..10527)
DNA (987bp) protein (329aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein id=2306537 bin=GWA2_Methylomirabilis_73_35 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldo/keto reductase Tax=GWA2_Rokubacteria_73_35_curated
aldo/keto reductase
13_1_40cm_scaffold_9748_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10832..10975
DNA (144bp) protein (48aa)
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KCZ72713.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Metha
13_1_40cm_scaffold_9748_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10989..12353)
DNA (1365bp) protein (455aa)
aor6; tungsten-containing aldehyde ferredoxin oxidoreductase Aor (EC:1.2.7.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde:ferredoxin oxidoreductase id=14627822 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
aldehyde:ferredoxin oxidoreductase
Displaying 12 items

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