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13_1_40cm_scaffold_1191

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1191_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3..419
DNA (417bp) protein (139aa)
hypothetical protein; K09990 hypothetical protein id=14626945 bin=bin7_NC10_sister species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K09990 hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_1191_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

483..1847
DNA (1365bp) protein (455aa)
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MmgE/PrpD family protein id=4756871 bin=GWC2_Methylomirabilis_70_16 species=Mesorhizobium loti genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uncharacterized protein involved in propionate catabolism
13_1_40cm_scaffold_1191_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1887..3080
DNA (1194bp) protein (398aa)
alpha-methylacyl-CoA racemase (EC:5.1.99.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4169030 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
carnitine dehydratase
13_1_40cm_scaffold_1191_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3087..4175)
DNA (1089bp) protein (363aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Patatin id=4226283 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1191_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4330..5766
DNA (1437bp) protein (479aa)
hypothetical protein id=14626624 bin=bin7_NC10_sister species=Caminibacter mediatlanticus genus=Caminibacter taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_1191_6
unknown

Not on your lists

5763..5963
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_1191_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

6013..6207
DNA (195bp) protein (65aa)
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Uncharacterized protein id=14430726 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
13_1_40cm_scaffold_1191_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6208..6477
DNA (270bp) protein (90aa)
hypothetical protein
hypothetical protein id=14430725 bin=bin3_NC10 species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
13_1_40cm_scaffold_1191_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6486..7055)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036E0E27
putative phosphohistidine phosphatase SixA Tax=GWA2_Rokubacteria_73_35_curated
putative phosphohistidine phosphatase SixA
13_1_40cm_scaffold_1191_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7052..8038)
DNA (987bp) protein (329aa)
putative hydrolase transmembrane protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
putative hydrolase transmembrane protein id=14429957 bin=bin3_NC10 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative hydrolase transmembrane protein
13_1_40cm_scaffold_1191_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8035..8649)
DNA (615bp) protein (205aa)
Cytochrome c, class I n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46Q21_CUPPJ
class I cytochrome c Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cytochrome c, class I
13_1_40cm_scaffold_1191_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8735..9277)
DNA (543bp) protein (181aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glucose / Sorbosone dehydrogenase family protein
L-sorbosone dehydrogenase id=4141669 bin=GWF2_Planctomycetes_42_9 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
13_1_40cm_scaffold_1191_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10014..10400
DNA (387bp) protein (129aa)
cell envelope biogenesis protein TonB n=1 Tax=Erwinia carotovora RepID=UPI0001A43899
TonB family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
energy transducer TonB
13_1_40cm_scaffold_1191_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10397..12454
DNA (2058bp) protein (686aa)
Putative TonB-dependent receptor n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHT3_9BACT
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
TonB-dependent receptor
13_1_40cm_scaffold_1191_15
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12460..13119
DNA (660bp) protein (220aa)
cell envelope biogenesis protein TonB n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023757CC
TonB family protein
TonB family protein {ECO:0000313|EMBL:EJE51786.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
13_1_40cm_scaffold_1191_16
Pseudomonas sp. CF161, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13417..14064)
DNA (648bp) protein (216aa)
Putative amino acid ABC transporter membrane protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6IMI6_9PSED
Putative amino acid ABC transporter membrane protein {ECO:0000313|EMBL:EPL04372.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
glutamine/glutamate ABC transporter permease
13_1_40cm_scaffold_1191_17
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(14061..14738)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000372621B
amino acid ABC transporter membrane protein; K02029 polar amino acid transport system permease protein Tax=Caldatribacterium californiense
polar amino acid ABC transporter inner membrane subunit
13_1_40cm_scaffold_1191_18
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14735..15541)
DNA (807bp) protein (269aa)
glutamine ABC transporter substrate-binding protein n=1 Tax=Bacillus endophyticus RepID=UPI0002ED66F4
glnH; ABC transporter glutamine-binding protein GlnH precursor
Tax=BJP_08E140C01_Clostridiales_46_19
13_1_40cm_scaffold_1191_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15538..16788)
DNA (1251bp) protein (417aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626658 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_1191_20
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(16792..17502)
DNA (711bp) protein (237aa)
pdhR; GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_cura
transcriptional regulator id=14626765 bin=bin7_NC10_sister species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
transcriptional regulator
13_1_40cm_scaffold_1191_21
Amorphus coralli, Amorphus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17607..17957
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000381661B
13_1_40cm_scaffold_1191_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17961..18719
DNA (759bp) protein (253aa)
extradiol ring-cleavage dioxygenase class III protein subunit B; K05713 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031FBBB7
hypothetical protein
13_1_40cm_scaffold_1191_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18721..19170
DNA (450bp) protein (150aa)
DoxX family protein; K15977 putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K15977 putative oxidoreductase id=14431357 bin=bin3_NC10 species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_1191_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

19176..19442
DNA (267bp) protein (89aa)
formamidase (EC:3.5.1.49) Tax=GWC2_Rokubacteria_70_16_curated
formamidase (EC:3.5.1.49)
Formamidase id=4766431 bin=GWC2_Methylomirabilis_70_16 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1191_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

19475..20218
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037C611B
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EDY20516.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Elli
ring-cleaving dioxygenase
13_1_40cm_scaffold_1191_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20228..21064
DNA (837bp) protein (279aa)
Putative N5,N10-methylenetetrahydromethanopterin reductase-related protein id=4935480 bin=GWC2_Methylomirabilis_70_24 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
oxidoreductase
13_1_40cm_scaffold_1191_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21061..21489
DNA (429bp) protein (143aa)
ppox class F420-dependent protein Tax=GWA2_Rokubacteria_73_35_curated
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding id=4828262 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_1191_28
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

21506..21982
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000365201D
Strain A contig00028, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ54781.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
phosphoribosyltransferase
13_1_40cm_scaffold_1191_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22211..22705
DNA (495bp) protein (165aa)
MOSC domain containing protein id=3776762 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
sulferase (MOSC domain)
13_1_40cm_scaffold_1191_30
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

22731..23414
DNA (684bp) protein (228aa)
aldehyde dehydrogenase n=1 Tax=Alicyclobacillus pohliae RepID=UPI000362186C
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
Displaying items 1-30 of 57 in total

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