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13_1_40cm_scaffold_454_13

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: 12359..13204

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component id=3247809 bin=GWF2_Methylomirabilis_70_14 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 281.0
  • Bit_score: 499
  • Evalue 2.50e-138
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 271.0
  • Bit_score: 493
  • Evalue 2.50e-136
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 270.0
  • Bit_score: 326
  • Evalue 8.00e-87

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGGCGGTCACGCATCGTCCACTGCTGACCAAGATCGCGCTGCACCTGGGGCTGGTGCCGTTCCTGATCTTCGCGCTCTTCCCCTTCTACCACATGGCGCTGACATCGCTGAAGACGGACCGGGAGCTGTACGATCGCGAGGCGGTGCCCCTGCTGATCCGTCAGGGGCCCACGCTCGAGCACTACCAGAAGCTGCTCTGGGACACCGGGTTCTTGACCTGGACGAAGAACAGCCTGCTCGTCACCATGCTGGCGACCACCGTGTCGGTGATCATCGGCACCATCGCCGCCTACGCGCTGGCCCGCCTGCGGTTCTTCGGCGTCAACACGTTCGGCACCGGGATCTTCGTCACCTACCTGGTGCCGACGTCATTGCTCTTCCTGCCGCTGGCCCAGGTGGTGCACTGGCTGGGGCTGGCCGACTCCAAGTGGGCGCTGGTCGTCACCTACCCCACCTTCCTGGTCCCGTTCTGCACCTGGCTGCTGATGGGCTACTTCCGCACCGTGCCCAAAGAGGTCGAGGAGTGCGCCATGGTCGACGGCGCCACTCGCCTGCAGGCGCTCACCCGCATCGTGCTGCCCATGGCCGTGCCCGGGCTGGTCTGTGCCGTGCTCTTCGCCTTCACGCTCTCCTGGAACGAGTTCATCTACGCGCTGACCTTCACGTCGTCGTCGGACGAGATCACGGCCAGCGTCGGCGTCACCAGCGAGCTGATCCGCGGCGACATCTACTTCTGGGGCGGGCTCATGGCCGGGGCGATGCTGGCCTCGGTGCCGATCGTGCTGCTCTACGTCTTCTTCCTCGACTACTATGTCTCCGGGCTCACCGCCGGCGCGGTGAAGTAG
PROTEIN sequence
Length: 282
MAVTHRPLLTKIALHLGLVPFLIFALFPFYHMALTSLKTDRELYDREAVPLLIRQGPTLEHYQKLLWDTGFLTWTKNSLLVTMLATTVSVIIGTIAAYALARLRFFGVNTFGTGIFVTYLVPTSLLFLPLAQVVHWLGLADSKWALVVTYPTFLVPFCTWLLMGYFRTVPKEVEECAMVDGATRLQALTRIVLPMAVPGLVCAVLFAFTLSWNEFIYALTFTSSSDEITASVGVTSELIRGDIYFWGGLMAGAMLASVPIVLLYVFFLDYYVSGLTAGAVK*