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13_1_40cm_scaffold_1859

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1859_1
unknown

Not on your lists

comp(3..92)
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_scaffold_1859_2
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89..679)
DNA (591bp) protein (197aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNN6_RHISN
ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:ACP21694.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer gro
13_1_40cm_scaffold_1859_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(676..1014)
DNA (339bp) protein (113aa)
UPI0003D05F92 related cluster n=1 Tax=unknown RepID=UPI0003D05F92
Uncharacterized protein {ECO:0000313|EMBL:KGT79401.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
ABC transporter substrate-binding protein
13_1_40cm_scaffold_1859_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1011..3920)
DNA (2910bp) protein (970aa)
two-component hybrid sensor and regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Histidine kinase,HAMP domain-containing protein,histidine kinase,cache domain-containing protein,GAF domain-containing protein id=3112752 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two-component hybrid sensor and regulator
13_1_40cm_scaffold_1859_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3920..4546)
DNA (627bp) protein (209aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4388217 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
redoxin domain-containing protein
13_1_40cm_scaffold_1859_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4556..4957)
DNA (402bp) protein (134aa)
Redoxin domain protein id=4888001 bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_scaffold_1859_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4957..5310)
DNA (354bp) protein (118aa)
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3956328 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_1859_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5384..6634
DNA (1251bp) protein (417aa)
DNA ligase D n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSH6_TISMK
DNA ligase D
DNA ligase D {ECO:0000313|EMBL:AFK55714.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA
13_1_40cm_scaffold_1859_9
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6814..7299)
DNA (486bp) protein (162aa)
hemerythrin n=1 Tax=Pseudomonas fluorescens RepID=UPI000316D1B5
Hemerythrin HHE cation binding domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AJE19610.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
13_1_40cm_scaffold_1859_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7402..8628
DNA (1227bp) protein (409aa)
Cytochrome P450 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3THY2_TISMK
Uncharacterized protein {ECO:0000313|EMBL:ETX02578.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
pksS; cytochrome P450
13_1_40cm_scaffold_1859_11
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8625..9080
DNA (456bp) protein (152aa)
Putative dehydratase, MaoC-like domain n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WGX3_RALSL
Putative dehydratase, MaoC-like domain {ECO:0000313|EMBL:CCF99028.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralst
maoC; maoc-like dehydratase; protein
13_1_40cm_scaffold_1859_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9077..9985)
DNA (909bp) protein (303aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=3784125 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_1859_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10325..10516
DNA (192bp) protein (64aa)
4-oxalocrotonate tautomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4-oxalocrotonate tautomerase id=4048082 bin=GWA2_Methylomirabilis_73_35 species=Mesorhizobium amorphae genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1859_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10513..11355
DNA (843bp) protein (281aa)
gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17] Tax=GWA2_Rokubacteria_73_35_curated
gluconolactonase (EC:3.1.1.17)
Gluconolactonase id=4019697 bin=GWF2_Methylomirabilis_70_14 species=Mesorhizobium ciceri genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1859_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11383..12573
DNA (1191bp) protein (397aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family id=4851656 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=GWA2_Rokubacteria_70_23_curated
amino acid/amide ABC transporter substrate-binding protein, HAAT family
13_1_40cm_scaffold_1859_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12681..13466
DNA (786bp) protein (262aa)
branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_
Putative permease protein, branched-chain amino acid ABC-type transport system id=4851657 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator
13_1_40cm_scaffold_1859_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13463..14437
DNA (975bp) protein (325aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family id=4851658 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter membrane protein 2, HAAT family Tax=GWA2_Rokubacteria_70_23_curated
amino acid/amide ABC transporter membrane protein 2, HAAT family
13_1_40cm_scaffold_1859_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14430..15170
DNA (741bp) protein (247aa)
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter family protein id=4048078 bin=GWA2_Methylomirabilis_73_35 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
13_1_40cm_scaffold_1859_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15362..16084
DNA (723bp) protein (241aa)
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=4047992 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
13_1_40cm_scaffold_1859_20
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16088..17200)
DNA (1113bp) protein (371aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1245469 species="Bacteria; Proteobacter
Putative homoserine O-acetyltransferase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A055_9BRAD
putative homoserine O-acetyltransferase
13_1_40cm_scaffold_1859_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17272..17568
DNA (297bp) protein (99aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4388230 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1859_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17570..18625
DNA (1056bp) protein (352aa)
Farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
Farnesyl-diphosphate farnesyltransferase id=3659323 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1859_23
Solanum tuberosum, Solanum, Solanales, asterids, Streptophyta, Viridiplantae

Not on your lists

18711..19007
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Solanum tuberosum RepID=M1BRI8_SOLTU
Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400051265}; TaxID=4113 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyl
infB; translation initiation factor IF-2
13_1_40cm_scaffold_1859_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(19004..19900)
DNA (897bp) protein (299aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase, M23/M37 family id=4388234 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1859_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19897..20781)
DNA (885bp) protein (295aa)
Putative uncharacterized protein id=4388235 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_1859_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20904..21161
DNA (258bp) protein (86aa)
id=3659327 Tax=GWA2_Rokubacteria_73_35_curated
id=3659327 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1859_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21296..22018
DNA (723bp) protein (241aa)
id=3659328 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3659328 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1859_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22425..23288)
DNA (864bp) protein (288aa)
Putative ATPase, Mrp homolog id=4388291 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mrp; putative ATPase; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ParA/MinD ATPase-like protein
13_1_40cm_scaffold_1859_29
unknown

Not on your lists

comp(23518..23952)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_scaffold_1859_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23952..25343)
DNA (1392bp) protein (464aa)
putative heme d1 biosynthesis radical SAM protein NirJ2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
radical SAM protein id=14626559 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
radical SAM family Fe-S protein
Displaying items 1-30 of 34 in total

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