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13_1_40cm_scaffold_422

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_422_1
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(1..942)
DNA (942bp) protein (314aa)
O-acetylserine (thiol)-lyase; K01738 cysteine synthase A [EC:2.5.1.47] Tax=RBG_16_Zixibacteria_53_22_curated
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A id=4734592 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_422_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(964..1779)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DHS8_BRAJP
hypothetical protein; K02053 putative spermidine/putrescine transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_scaffold_422_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1779..2606)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DHS9_BRAJP
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_scaffold_422_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2621..3688)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DHT0_BRAJP
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_scaffold_422_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3690..4850)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DHT1_BRAJP
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_scaffold_422_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4870..5769)
DNA (900bp) protein (300aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9F9_SPHTD
phenazine biosynthesis protein PhzF family
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:ACZ40452.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sph
13_1_40cm_scaffold_422_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5785..6177)
DNA (393bp) protein (131aa)
UPF0102 protein STH1475 id=4734627 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K07460 putative endonuclease Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_422_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

6309..6620
DNA (312bp) protein (104aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein id=14624674 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
13_1_40cm_scaffold_422_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6598..6843
DNA (246bp) protein (82aa)
prevent-host-death protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
prevent-host-death protein id=14624675 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
prevent-host-death protein
13_1_40cm_scaffold_422_10
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7147..8265
DNA (1119bp) protein (373aa)
Methyltransferase type 12 n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XCP0_9CHRO
Methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:AFZ30263.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
13_1_40cm_scaffold_422_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8299..8688
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y5L2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88171.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_422_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8749..9363
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E9E028
FMN-binding negative transcriptional regulator; K07734 transcriptional regulator Tax=CG_Rhodof_02
FMN-binding negative transcriptional regulator
13_1_40cm_scaffold_422_13
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9376..9885
DNA (510bp) protein (170aa)
GCN5 family N-acetyltransferase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6MAP8_9BACL
GCN5 family N-acetyltransferase {ECO:0000313|EMBL:EST54955.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25
GCN5 family acetyltransferase
13_1_40cm_scaffold_422_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9882..10256
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94078.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
13_1_40cm_scaffold_422_15
unknown

Not on your lists

10264..10695
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_40cm_scaffold_422_16
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

10679..11311
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00035C5F0A
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RBG_16_Chloroflexi_64_43_curated
MgtC/SapB transporter
13_1_40cm_scaffold_422_17
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(11316..11840)
DNA (525bp) protein (175aa)
hypothetical protein Tax=RBG_16_Chloroflexi_54_11_curated
13_1_40cm_scaffold_422_18
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11931..12653
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003746652
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY77566.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
13_1_40cm_scaffold_422_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12664..13119)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB9F
conserved hypothetical protein, DUF2587 superfamily Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_422_20
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(13149..13820)
DNA (672bp) protein (224aa)
Putative membrane protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EG64_9CHLR
Putative membrane protein {ECO:0000313|EMBL:CCF83676.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" sour
putative membrane protein (DUF2306)
13_1_40cm_scaffold_422_21
unknown

Not on your lists

comp(13841..14347)
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_scaffold_422_22
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14344..14910)
DNA (567bp) protein (189aa)
Transcriptional regulator, PadR family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XEZ4_9CHRO
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:AFZ31195.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 742
13_1_40cm_scaffold_422_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14962..15600)
DNA (639bp) protein (213aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=GWA2_Rokubacteria_73_35_curated
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII id=4734640 bin=GWA2_Methylomirabilis_73_35 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_422_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(15618..15992)
DNA (375bp) protein (125aa)
50S ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L19 id=3772772 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplS; 50S ribosomal protein L19
13_1_40cm_scaffold_422_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16015..16749)
DNA (735bp) protein (245aa)
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=GWA2_Rokubacteria_73_35_curated
tRNA (Guanine-N1)-methyltransferase id=4734641 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA (guanine-N1)-methyltransferase
13_1_40cm_scaffold_422_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(16771..17292)
DNA (522bp) protein (174aa)
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
16S rRNA-processing protein RimM id=5019513 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
16S rRNA processing protein RimM
13_1_40cm_scaffold_422_27
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(17285..17515)
DNA (231bp) protein (77aa)
UPF0109 protein NITGR_380022 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZC03_9BACT
UPF0109 protein NITGR_380022 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (str
hypothetical protein
13_1_40cm_scaffold_422_28
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(17541..17786)
DNA (246bp) protein (82aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
30S ribosomal protein S16 id=4505275 bin=GWF2_Methylomirabilis_70_14 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsP; 30S ribosomal protein S16
13_1_40cm_scaffold_422_29
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


comp(17791..18111)
DNA (321bp) protein (107aa)
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 id=14625198 bin=bin7_NC10_sister species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
signal recognition particle protein
Displaying 29 items

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