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13_1_40cm_scaffold_547

Search features with annotation key words

Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_547_1
unknown

Not on your lists

1..111
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_scaffold_547_2
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

153..1220
DNA (1068bp) protein (356aa)
Putative uncharacterized protein id=4761815 bin=GWA2_Elusimicrobia_69_24 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
G-D-S-L family lipolytic protein Tax=GWA2_Elusimicrobia_69_24_curated
hypothetical protein
13_1_40cm_scaffold_547_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1649..1876)
DNA (228bp) protein (76aa)
Putative two-component system response regulator n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KRE9_RHISN
two-component system response regulator
Putative two-component system response regulator {ECO:0000313|EMBL:ACP22657.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group
13_1_40cm_scaffold_547_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1890..2717)
DNA (828bp) protein (276aa)
Flagellin domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGE6_RHOM4
flagellin domain-containing protein
Flagellin domain protein {ECO:0000313|EMBL:ACY47702.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
13_1_40cm_scaffold_547_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2829..3368)
DNA (540bp) protein (180aa)
Outer membrane protein, OmpA/MotB family id=4347231 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
outer membrane protein, OmpA/MotB family Tax=GWA2_Rokubacteria_70_23_curated
OmpA/MotB domain-containing protein
13_1_40cm_scaffold_547_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3365..4231)
DNA (867bp) protein (289aa)
Chemotaxis protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGE1_9BACT
Flagellar motor stator protein MotA {ECO:0000313|EMBL:CDM65634.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
chemotaxis protein
13_1_40cm_scaffold_547_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4375..5604
DNA (1230bp) protein (410aa)
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=GWA2_Rokubacteria_70_23_curated
Chemotaxis protein cheA id=2322394 bin=GWA2_Methylomirabilis_73_35 species=Asticcacaulis biprosthecium genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
chemotaxis protein histidine kinase-like protein
13_1_40cm_scaffold_547_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5604..5891
DNA (288bp) protein (96aa)
cheA; chemotaxis protein CheA (EC:2.7.3.-); K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=GWA2_Rokubacteria_73_35_curated
cheA; chemotaxis protein cheA (EC:2.7.3.-)
Chemotaxis protein cheA id=2322394 bin=GWA2_Methylomirabilis_73_35 species=Asticcacaulis biprosthecium genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_547_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5891..7300
DNA (1410bp) protein (470aa)
cheR; chemotaxis protein methyltransferase (EC:2.1.1.80) Tax=GWA2_Rokubacteria_70_23_curated
cheR; chemotaxis protein methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGK0_9BACT
13_1_40cm_scaffold_547_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7297..7779
DNA (483bp) protein (161aa)
Outer membrane protein, OmpA/MotB family n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGE2_9BACT
outer membrane protein, OmpA/MotB family
Outer membrane protein, OmpA/MotB family {ECO:0000313|EMBL:CBE68823.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyf
13_1_40cm_scaffold_547_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7937..8590
DNA (654bp) protein (218aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=4205768 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_547_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8810..10090
DNA (1281bp) protein (427aa)
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
two component, sigma54 specific, Fis family transcriptional regulator id=16874721 bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
acetoacetate metabolism regulatory protein AtoC
13_1_40cm_scaffold_547_13
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10087..10455
DNA (369bp) protein (123aa)
chemotactic response regulator CheY; K03413 two-component system, chemotaxis family, response regulator CheY Tax=RBG_13_Deltaproteobacteria_60_28_curated
Response regulator receiver protein id=4347228 bin=GWC2_Methylomirabilis_70_24 species=Helicobacter bilis genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
response regulator receiver protein
13_1_40cm_scaffold_547_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

10452..11213
DNA (762bp) protein (254aa)
sensor histidine kinase; K07709 two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Sensor protein (EC:2.7.13.3)
hypothetical protein, partial n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000380C9DB
13_1_40cm_scaffold_547_15
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11210..12511
DNA (1302bp) protein (434aa)
fleR; sigma-54 dependent response regulator FleR; K10943 two component system, response regulator FlrC Tax=CG_Delta_02
Two component, sigma54 specific, transcriptional regulator, Fis family id=4322678 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family transcriptional regulator
13_1_40cm_scaffold_547_16
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

12806..14119
DNA (1314bp) protein (438aa)
ATPase, FliI/YscN family {ECO:0000313|EMBL:EFC90325.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EFC90325.1};; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosul
fliI; flagellum-specific ATP synthase (EC:3.6.3.14)
ATPase, FliI/YscN family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z3L9_9BACT
13_1_40cm_scaffold_547_17
unknown

Not on your lists

14116..14529
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_scaffold_547_18
unknown

Not on your lists

14526..14789
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_scaffold_547_19
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14786..15769
DNA (984bp) protein (328aa)
Flagellar biosynthesis protein, initiation of hook assembly n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3K8B8_PSEPF
Flagellar basal body rod modification protein FlgD {ECO:0000313|EMBL:KHA69929.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
flgD; flagellar basal body rod modification protein
13_1_40cm_scaffold_547_20
Streptomyces griseocarneus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15782..16762
DNA (981bp) protein (327aa)
RNA polymerase sigma factor n=1 Tax=Streptomyces griseocarneus RepID=Q06384_9ACTO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=51201 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseocarneus.;"
RNA polymerase sigma factor WhiG
13_1_40cm_scaffold_547_21
unknown

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comp(16837..17109)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_scaffold_547_22
unknown

Not on your lists

17143..17421
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_scaffold_547_23
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

18230..19159
DNA (930bp) protein (310aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_scaffold_547_24
unknown

Not on your lists

19170..19277
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_scaffold_547_25
unknown

Not on your lists

19278..19658
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_40cm_scaffold_547_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19846..21606
DNA (1761bp) protein (587aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type IV-A pilus assembly ATPase PilB id=3773045 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pilB; type IV pilus biogenesis ATPase PilB
13_1_40cm_scaffold_547_27
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(21654..22217)
DNA (564bp) protein (188aa)
Rhs family protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S024_9BURK
Teneurin-3 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_40cm_scaffold_547_28
unknown

Not on your lists

comp(22440..22571)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_scaffold_547_29
unknown

Not on your lists

comp(22622..22777)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_scaffold_547_30
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22881..23324)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B79580
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB95726.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica s
Displaying items 1-30 of 50 in total

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