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13_1_40cm_scaffold_677

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_677_1
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..298
DNA (297bp) protein (99aa)
Di-heme cytochrome-c peroxidase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8P7_MYXSD
di-heme cytochrome-c peroxidase
Di-heme cytochrome-c peroxidase {ECO:0000313|EMBL:AGC43917.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source
13_1_40cm_scaffold_677_trna_1
unknown

Not on your lists

comp(569..647)
DNA (79bp)
transferRNA
13_1_40cm_scaffold_677_2
Entamoeba invadens, Entamoeba, Eukaryota

Not on your lists

788..1069
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Entamoeba invadens RepID=S0B3I3_ENTIV
Uncharacterized protein {ECO:0000313|EMBL:BAN42018.1}; TaxID=33085 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba invadens.;"
hypothetical protein
13_1_40cm_scaffold_677_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1100..1828
DNA (729bp) protein (243aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14626359 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_677_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1889..2212)
DNA (324bp) protein (108aa)
lipoprotein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lipoprotein id=14626358 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lipoprotein
13_1_40cm_scaffold_677_5
unknown

Not on your lists

comp(2290..2610)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_scaffold_677_6
unknown

Not on your lists

comp(2607..3011)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_scaffold_677_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3166..4524)
DNA (1359bp) protein (453aa)
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator id=14626361 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
13_1_40cm_scaffold_677_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5035..7434
DNA (2400bp) protein (800aa)
sensor histidine kinase protein (EC:2.7.13.3)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Response regulator receiver sensor signal transduction histidine kinase id=4050213 bin=GWA2_Deltaproteo_65_63 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_677_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7431..7748
DNA (318bp) protein (106aa)
Signal transduction histidine kinase Tax=RBG_16_Actinobacteria_67_10_curated
Putative Histidine kinase id=2877061 bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PAS sensor protein
13_1_40cm_scaffold_677_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8026..10800
DNA (2775bp) protein (925aa)
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Excinuclease ABC, subunit A id=4232696 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uvrA; excinuclease ABC subunit A
13_1_40cm_scaffold_677_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10802..12094
DNA (1293bp) protein (431aa)
Twin-arginine translocation pathway signal id=2589436 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator transporter Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily protein
13_1_40cm_scaffold_677_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12166..13386
DNA (1221bp) protein (407aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176) Tax=GWA2_Rokubacteria_73_35_curated
Putative lipid-transfer protein id=2589435 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 888 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiolase
13_1_40cm_scaffold_677_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13395..13901
DNA (507bp) protein (169aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2589434 bin=GWA2_Methylomirabilis_73_35 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_677_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14036..14317)
DNA (282bp) protein (94aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_scaffold_677_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14314..14721)
DNA (408bp) protein (136aa)
UPI0003D60502 related cluster n=1 Tax=unknown RepID=UPI0003D60502
putative dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_677_16
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14891..15793)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036F7706
Uncharacterized protein {ECO:0000313|EMBL:ETX04470.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
acetamidase/Formamidase
13_1_40cm_scaffold_677_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15790..16008)
DNA (219bp) protein (73aa)
Selenoprotein id=2589430 bin=GWA2_Methylomirabilis_73_35 species=Roseobacter sp. GAI101 genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
selenoprotein Tax=GWA2_Rokubacteria_73_35_curated
selenoprotein
13_1_40cm_scaffold_677_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16030..16311)
DNA (282bp) protein (94aa)
selenoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Selenoprotein id=3285643 bin=GWC2_Methylomirabilis_70_24 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
selenoprotein
13_1_40cm_scaffold_677_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16322..17362)
DNA (1041bp) protein (347aa)
thiol-disulfide oxidoreductase domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein MkanA1_05815 id=2589429 bin=GWA2_Methylomirabilis_73_35 species=Hyphomonas neptunium genus=Hyphomonas taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_677_20
unknown

Not on your lists

comp(17874..18218)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_scaffold_677_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18238..18918)
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3285641 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_677_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18915..20060)
DNA (1146bp) protein (382aa)
hypothetical protein; K07161 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Carbon monoxide dehydrogenase E protein id=4232684 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_677_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20328..21236)
DNA (909bp) protein (303aa)
ATPase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4602158 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase
13_1_40cm_scaffold_677_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

21364..22230
DNA (867bp) protein (289aa)
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:2.7.8.23 4.1.3.-)
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase id=2772881 bin=GWA2_Methylomirabilis_73_35 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_677_25
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(22237..24459)
DNA (2223bp) protein (741aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034A409C
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AFY85235.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
13_1_40cm_scaffold_677_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(24518..25447)
DNA (930bp) protein (310aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625737 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Luciferase-like, subgroup
13_1_40cm_scaffold_677_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25518..26681
DNA (1164bp) protein (388aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=2773044 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
13_1_40cm_scaffold_677_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26686..27873
DNA (1188bp) protein (396aa)
Pm20d; peptidase M20 domain-containing protein 2 (Aminoacylase 1-like protein 2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amidohydrolase id=3861039 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hydrolase
13_1_40cm_scaffold_677_29
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

27898..28452
DNA (555bp) protein (185aa)
sodC; Cu,Zn superoxide dismutase (SOD), periplasmic (EC:1.15.1.1); K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1] id=14626963 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
sodC; Cu,Zn superoxide dismutase (SOD), periplasmic (EC:1.15.1.1); K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1] Tax=CSP1_6_Rokubacteria
sodC; Cu,Zn superoxide dismutase (SOD), periplasmic (EC:1.15.1.1)
Displaying items 1-30 of 44 in total

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