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13_1_40cm_scaffold_12854

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12854_1
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..862)
DNA (861bp) protein (287aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Putative uncharacterized protein id=2259308 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein
13_1_40cm_scaffold_12854_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1142..3199
DNA (2058bp) protein (686aa)
FAD dependent oxidoreductase id=3399454 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
sarcosine dehydrogenase
13_1_40cm_scaffold_12854_3
Lepisosteus oculatus, Lepisosteus, Semionotiformes, Neopterygii, Chordata, Metazoa

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3511..4566
DNA (1056bp) protein (352aa)
Phosphotriesterase-related protein n=1 Tax=Tetraodon nigroviridis RepID=PTER_TETNG
Uncharacterized protein {ECO:0000313|Ensembl:ENSLOCP00000012828}; TaxID=7918 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionoti
resiniferatoxin-binding, phosphotriesterase-like protein
13_1_40cm_scaffold_12854_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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4579..5568
DNA (990bp) protein (330aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14628122 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_12854_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5584..6273)
DNA (690bp) protein (230aa)
Putative esterase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDD0_METNO
Uncharacterized protein {ECO:0000313|EMBL:ETW98516.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative esterase
13_1_40cm_scaffold_12854_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(6275..6946)
DNA (672bp) protein (224aa)
zinc-containing alcohol dehydrogenase superfamily protein; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] Tax=RBG_16_Chloroflexi_68_14_curated
Alcohol dehydrogenase (EC:1.1.1.1)
PREDICTED: alcohol dehydrogenase class-3-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18E91
13_1_40cm_scaffold_12854_7
unknown

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6969..7544
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_40cm_scaffold_12854_8

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comp(7358..8512)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI0003787A7C
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06055.1}; TaxID=455506 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_005H07.;"
major facilitator superfamily protein
13_1_40cm_scaffold_12854_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8573..9283)
DNA (711bp) protein (237aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Putative enoyl-CoA hydratase/isomerase family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCH0_9ZZZZ
Crotonase {ECO:0000313|EMBL:ETW98063.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_1_40cm_scaffold_12854_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9274..10542)
DNA (1269bp) protein (423aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JRF1_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:ETX01083.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Rieske (2Fe-2S) protein
13_1_40cm_scaffold_12854_11
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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10650..11210
DNA (561bp) protein (187aa)
id=14623615 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=CSP1_8_Deltaproteobacteria
13_1_40cm_scaffold_12854_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11283..11492
DNA (210bp) protein (70aa)
alcohol dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
Alcohol dehydrogenase id=2961591 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Threonine dehydrogenase-related Zn-dependent dehydrogenase
13_1_40cm_scaffold_12854_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(11489..11647)
DNA (159bp) protein (53aa)
RNA polymerase sigma factor Tax=GWA2_Rokubacteria_73_35_curated
Putative RNA polymerase sigma factor id=4219874 bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 13 items

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