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13_1_40cm_scaffold_16

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Displaying items 1-30 of 66 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_16_1
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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1..399
DNA (399bp) protein (133aa)
methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=GWC2_Nitrospirae_57_13_curated
protein-(glutamine-N5) methyltransferase (EC:2.1.1.72)
Release factor glutamine methyltransferase id=4948401 bin=GWC2_Nitrospirae_57_13 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_1_40cm_scaffold_16_2

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519..1601
DNA (1083bp) protein (361aa)
Transposase, IS605 OrfB family n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K931_NITWC
Marine sediment metagenome DNA, contig: S01H4_L00267 {ECO:0000313|EMBL:GAG56486.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
IS605 OrfB family transposase
13_1_40cm_scaffold_16_3
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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1611..2279
DNA (669bp) protein (223aa)
translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein id=14631541 bin=bin9_gal15 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CSP1_3_Armatimonadetes
Sua5/YciO/YrdC/YwlC family protein
13_1_40cm_scaffold_16_4
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria

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2284..2781
DNA (498bp) protein (166aa)
Sugar phosphate isomerase RpiB/LacA/LacB family n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXR4_9BACT
Sugar phosphate isomerase RpiB/LacA/LacB family {ECO:0000313|EMBL:ACO70887.1}; TaxID=156588 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured Verrucomicrobia bacterium.;"
RpiB; ribose 5-phosphate isomerase RpiB
13_1_40cm_scaffold_16_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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2778..3476
DNA (699bp) protein (233aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] id=14631539 bin=bin9_gal15 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=CSP1_3_Armatimonadetes
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
13_1_40cm_scaffold_16_6
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

3627..4058
DNA (432bp) protein (144aa)
zinc-binding CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] id=14631537 bin=bin9_gal15 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=bin9_gal15 organism_group=GAL15
zinc-binding CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=CSP1_3_Armatimonadetes
comEB; ComE operon protein 2 (EC:3.5.-.-)
13_1_40cm_scaffold_16_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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4184..4999
DNA (816bp) protein (272aa)
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=14632271 bin=bin9_gal15 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin9_gal15 organism_group=GAL15
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=CSP1_3_Armatimonadetes
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
13_1_40cm_scaffold_16_8
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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5100..5720
DNA (621bp) protein (207aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RBG_16_Armatimonadetes_67_12_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=14632272 bin=bin9_gal15 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
pth; peptidyl-tRNA hydrolase
13_1_40cm_scaffold_16_9
R_WOR_1_53_15, WOR-1, Bacteria

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5798..8143
DNA (2346bp) protein (782aa)
hppA; H+ translocating pyrophosphate synthase (pyrophosphate-energized proton pump) (Pyrophosphate-energized inorganic pyrophosphatase) (EC:3.6.1.1) Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hppA; H+ translocating pyrophosphate synthase (pyrophosphate-energized proton pump) (Pyrophosphate-energized inorganic pyrophosphatase) (EC:3.6.1.1) id=14429911 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hppA; H+ translocating pyrophosphate synthase (pyrophosphate-energized proton pump) (Pyrophosphate-energized inorganic pyrophosphatase) (EC:3.6.1.1)
13_1_40cm_scaffold_16_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8169..9620)
DNA (1452bp) protein (484aa)
sporulation domain-containing protein id=24426877 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
sporulation domain-containing protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Protein of unknown function DUF2233, periplasmic
13_1_40cm_scaffold_16_11
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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10029..11384
DNA (1356bp) protein (452aa)
Putative integrase core domain protein n=1 Tax=uncultured marine microorganism HF4000_005H07 RepID=B3T0D4_9ZZZZ
integrase catalytic subunit Tax=RBG_16_Acidobacteria_64_8_curated
Integrase catalytic subunit
13_1_40cm_scaffold_16_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

11532..12962
DNA (1431bp) protein (477aa)
cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] id=24426876 bin=RBG_19FT_COMBO_GAL15_69_19 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
cobyrinic acid A,C-diamide synthase
13_1_40cm_scaffold_16_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

13004..13288
DNA (285bp) protein (95aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=14425515 bin=bin1_lowGC species=Sulfolobus tokodaii genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin1_lowGC organism_group=Unknown_CP
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=CSP1_2_Dadabacteria
transcriptional coactivator/pterin dehydratase
13_1_40cm_scaffold_16_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(13346..13678)
DNA (333bp) protein (111aa)
hypothetical protein id=24426874 bin=RBG_19FT_COMBO_GAL15_69_19 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
metal-sulfur cluster biosynthetic enzyme
13_1_40cm_scaffold_16_15
unknown

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comp(13831..13977)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_scaffold_16_16
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(14245..15354)
DNA (1110bp) protein (370aa)
mandelate racemase/muconate lactonizing protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] id=24426871 bin=RBG_19FT_COMBO_GAL15_69_19 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
mandelate racemase/muconate lactonizing protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
mandelate racemase/muconate lactonizing protein
13_1_40cm_scaffold_16_17
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(15351..16190)
DNA (840bp) protein (280aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein id=24426870 bin=RBG_19FT_COMBO_GAL15_69_19 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_scaffold_16_18
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(16257..17855)
DNA (1599bp) protein (533aa)
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] id=24426869 bin=RBG_19FT_COMBO_GAL15_69_19 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
nicotinate phosphoribosyltransferase
13_1_40cm_scaffold_16_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(17959..19131)
DNA (1173bp) protein (391aa)
adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] id=24426867 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
adenosylhomocysteinase
13_1_40cm_scaffold_16_20
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

19360..19836
DNA (477bp) protein (159aa)
peroxiredoxin (PRX) family, AhpE-like subfamily id=24426866 bin=RBG_19FT_COMBO_GAL15_69_19 species=Acidianus hospitalis genus=Acidianus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peroxiredoxin (PRX) family, AhpE-like subfamily Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
peroxiredoxin family protein
13_1_40cm_scaffold_16_21
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(19853..20932)
DNA (1080bp) protein (360aa)
DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] id=24426864 bin=RBG_19FT_COMBO_GAL15_69_19 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
DNA polymerase IV (EC:2.7.7.7)
13_1_40cm_scaffold_16_22
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(20929..21771)
DNA (843bp) protein (281aa)
hypothetical protein id=24426863 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_16_23
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

21978..23336
DNA (1359bp) protein (453aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] id=24426862 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
peptidase M16 domain-containing protein
13_1_40cm_scaffold_16_24
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

23333..24616
DNA (1284bp) protein (428aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] id=24426862 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
peptidase M16 domain-containing protein
13_1_40cm_scaffold_16_25
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

24616..25263
DNA (648bp) protein (216aa)
reduced coenzyme F420:NADP oxidoreductase (EC:1.6.99.-)
NADPH-dependent F420 reductase; K06988 id=24426861 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphingobium yanoikuyae genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
NADPH-dependent F420 reductase; K06988 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_16_26
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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25356..26120
DNA (765bp) protein (255aa)
putative F420-0--gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] id=24426860 bin=RBG_19FT_COMBO_GAL15_69_19 species=Kaistia granuli genus=Kaistia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative F420-0--gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
F420-0:gamma-glutamyl ligase (EC:6.3.2.-)
13_1_40cm_scaffold_16_27
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

26151..27281
DNA (1131bp) protein (377aa)
galactonate dehydratase (EC:4.2.1.6) id=24426859 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
galactonate dehydratase (EC:4.2.1.6) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
galactonate dehydratase (EC:4.2.1.6)
13_1_40cm_scaffold_16_28
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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27366..28340
DNA (975bp) protein (325aa)
TGS domain-containing protein; K06944 id=14630749 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
TGS domain-containing protein; K06944 Tax=CSP1_3_Armatimonadetes
GTPase
13_1_40cm_scaffold_16_29

Not on your lists

comp(28633..29664)
DNA (1032bp) protein (344aa)
Transposase, IS605 OrfB family n=1 Tax=Geobacillus thermoglucosidasius (strain C56-YS93) RepID=F8D2N2_GEOTC
Marine sediment metagenome DNA, contig: S01H4_L00267 {ECO:0000313|EMBL:GAG56486.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transposase, IS605 OrfB family
13_1_40cm_scaffold_16_30
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

29882..30565
DNA (684bp) protein (228aa)
tonoplast intrinsic protein (Aquaporin) Tax=RBG_16_Armatimonadetes_67_12_curated
MIP family channel protein; K06188 aquaporin Z id=24595023 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
tonoplast intrinsic protein (Aquaporin)
Displaying items 1-30 of 66 in total

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