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13_1_40cm_scaffold_18

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_18_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3..395)
DNA (393bp) protein (131aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
L-carnitine dehydratase/bile acid-inducible protein F id=14631916 bin=bin9_gal15 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
formyl-CoA transferase
13_1_40cm_scaffold_18_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(395..1231)
DNA (837bp) protein (279aa)
putative polyketide cyclase id=24480308 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative polyketide cyclase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
putative polyketide cyclase
13_1_40cm_scaffold_18_3
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

1336..2082
DNA (747bp) protein (249aa)
haloacid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] id=14632045 bin=bin9_gal15 species=Methylobacterium sp. GXF4 genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
haloacid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=CSP1_3_Armatimonadetes
haloacid dehalogenase
13_1_40cm_scaffold_18_4
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2274..3512
DNA (1239bp) protein (413aa)
Extracellular ligand-binding receptor n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SH09_THEM7
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
extracellular ligand-binding receptor
13_1_40cm_scaffold_18_5
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3563..4447
DNA (885bp) protein (295aa)
Inner-membrane translocator n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SH10_THEM7
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADU50641.1}; Flags: Precursor;; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaer
13_1_40cm_scaffold_18_6
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

4470..5507
DNA (1038bp) protein (346aa)
Inner-membrane translocator n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBY6_INTC7
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Chloroflexi_57_9_curated
inner-membrane translocator
13_1_40cm_scaffold_18_7
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

5504..6241
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y131_SORCE
amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Chloroflexi_57_9_curated
hypothetical protein
13_1_40cm_scaffold_18_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6241..6960
DNA (720bp) protein (240aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=14626076 bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
branched chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
branched chain amino acid ABC transporter ATP-binding protein
13_1_40cm_scaffold_18_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(7217..8455)
DNA (1239bp) protein (413aa)
hypothetical protein id=24505201 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_18_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8633..10186)
DNA (1554bp) protein (518aa)
FdrA family protein; K02381 FdrA protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
FdrA family protein; K02381 FdrA protein id=24505200 bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FdrA family protein
13_1_40cm_scaffold_18_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

10357..10998
DNA (642bp) protein (214aa)
hypothetical protein id=24505199 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_18_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(10964..11854)
DNA (891bp) protein (297aa)
peptidase M23 Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein id=24505189 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase M23 domain-containing protein
13_1_40cm_scaffold_18_13
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11856..12890)
DNA (1035bp) protein (345aa)
peptidase S58 DmpA; K01266 D-aminopeptidase [EC:3.4.11.19] id=24505188 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase S58 DmpA; K01266 D-aminopeptidase [EC:3.4.11.19] Tax=RBG_16_Armatimonadetes_67_12_curated
peptidase S58 DmpA
13_1_40cm_scaffold_18_14
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

13355..16114
DNA (2760bp) protein (920aa)
Putative signaling protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY95_ANATU
putative signaling protein Tax=RBG_16_Chloroflexi_64_43_curated
putative signaling protein
13_1_40cm_scaffold_18_15
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

16733..17914
DNA (1182bp) protein (394aa)
Response regulator n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0AJG2_BURTH
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_13_Chloroflexi_53_26_curated
response regulator
13_1_40cm_scaffold_18_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17929..18579
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:CDM67013.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methy
Two component transcriptional regulator, LuxR family id=3202284 bin=GWC2_Methylomirabilis_70_16 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
LuxR family DNA-binding response regulator
13_1_40cm_scaffold_18_17
unknown

Not on your lists

18740..19162
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_scaffold_18_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20022..20684
DNA (663bp) protein (221aa)
Response regulator receiver protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XDL2_9CHRO
response regulator receiver protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
response regulator receiver protein
13_1_40cm_scaffold_18_19
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20921..22528
DNA (1608bp) protein (536aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3S3_GEOUR
diguanylate cyclase
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ABQ26441.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobact
13_1_40cm_scaffold_18_20
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(22699..23256)
DNA (558bp) protein (186aa)
bifunctional deaminase-reductase domain-containing protein id=14631939 bin=bin9_gal15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
bifunctional deaminase-reductase domain-containing protein Tax=CSP1_3_Armatimonadetes
bifunctional deaminase-reductase domain-containing protein
13_1_40cm_scaffold_18_21
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23353..23808)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7X1_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS24817.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_scaffold_18_22
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(23930..24298)
DNA (369bp) protein (123aa)
Regulatory protein ArsR n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVU6_9RHIZ
ArsR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
ArsR family transcriptional regulator
13_1_40cm_scaffold_18_23
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24570..25511
DNA (942bp) protein (314aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=B3VP83_9BACT
lipase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
lipase/esterase
13_1_40cm_scaffold_18_24
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

25662..26036
DNA (375bp) protein (125aa)
4-carboxymuconolactone decarboxylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1C2_SPHTD
4-carboxymuconolactone decarboxylase
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ACZ38039.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaeroba
13_1_40cm_scaffold_18_25
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

26036..26761
DNA (726bp) protein (242aa)
protocatechuate 3,4-dioxygenase subunit beta (EC:1.13.11.3)
Protocatechuate 3,4-dioxygenase, beta subunit {ECO:0000313|EMBL:ACZ38040.1}; EC=1.13.11.3 {ECO:0000313|EMBL:ACZ38040.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobactera
Protocatechuate 3,4-dioxygenase, beta subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1C3_SPHTD
13_1_40cm_scaffold_18_26
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

26758..27333
DNA (576bp) protein (192aa)
protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3)
Protocatechuate 3,4-dioxygenase, alpha subunit {ECO:0000313|EMBL:ACZ38041.1}; EC=1.13.11.3 {ECO:0000313|EMBL:ACZ38041.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacter
Protocatechuate 3,4-dioxygenase, alpha subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1C4_SPHTD
13_1_40cm_scaffold_18_27
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

27339..28178
DNA (840bp) protein (280aa)
Coenzyme A transferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1C5_SPHTD
coenzyme A transferase
Coenzyme A transferase {ECO:0000313|EMBL:ACZ38042.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source
13_1_40cm_scaffold_18_28
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

28184..28972
DNA (789bp) protein (263aa)
glutaconate CoA-transferase (EC:2.8.3.12)
Glutaconate CoA-transferase {ECO:0000313|EMBL:ACZ38043.1}; EC=2.8.3.12 {ECO:0000313|EMBL:ACZ38043.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacteri
Glutaconate CoA-transferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1C6_SPHTD
13_1_40cm_scaffold_18_29
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

28969..30306
DNA (1338bp) protein (446aa)
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1C7_SPHTD
3-carboxy-cis,cis-muconate cycloisomerase
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:ACZ38044.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Spha
13_1_40cm_scaffold_18_30
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30430..30813
DNA (384bp) protein (128aa)
DoxX protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
DoxX family protein id=3435277 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying items 1-30 of 45 in total

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