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13_1_40cm_scaffold_188

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_188_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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1..201
DNA (201bp) protein (67aa)
ornithine cyclodeaminase (EC:4.3.1.12) id=24407474 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ornithine cyclodeaminase (EC:4.3.1.12) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ornithine cyclodeaminase (EC:4.3.1.12)
13_1_40cm_scaffold_188_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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276..1427
DNA (1152bp) protein (384aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=24407473 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_scaffold_188_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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1537..2043
DNA (507bp) protein (169aa)
Nitroreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TY33_9CHLR
Nitroreductase {ECO:0000313|EMBL:EFH85029.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM
nitroreductase
13_1_40cm_scaffold_188_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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2291..2713
DNA (423bp) protein (141aa)
MraZ protein; K03925 MraZ protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
MraZ protein; K03925 MraZ protein id=24407472 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
MraZ protein
13_1_40cm_scaffold_188_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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2795..3697
DNA (903bp) protein (301aa)
Ribosomal RNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] id=24407471 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Ribosomal RNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
S-adenosyl-methyltransferase MraW
13_1_40cm_scaffold_188_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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3993..4454
DNA (462bp) protein (154aa)
id=24407470 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24407470 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
cell division protein FtsL
13_1_40cm_scaffold_188_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

4623..6332
DNA (1710bp) protein (570aa)
stage V sporulation protein D (EC:2.4.1.129); K08384 stage V sporulation protein D (sporulation-specific penicillin-binding protein) id=24407469 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
penicillin-binding protein, transpeptidase; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
penicillin-binding protein
13_1_40cm_scaffold_188_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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6371..7903
DNA (1533bp) protein (511aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RBG_19FT_COMBO_Armatimo
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=24407468 bin=RBG_19FT_COMBO_GAL15_69_19 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
13_1_40cm_scaffold_188_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

7907..9301
DNA (1395bp) protein (465aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10) id=24407467 bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaeromusa acidaminophila genus=Anaeromusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
13_1_40cm_scaffold_188_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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9298..10251
DNA (954bp) protein (318aa)
mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=24407466 bin=RBG_19FT_COMBO_GAL15_69_19 species=Orenia marismortui genus=Orenia taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase
13_1_40cm_scaffold_188_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

10308..11771
DNA (1464bp) protein (488aa)
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] id=24407465 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
13_1_40cm_scaffold_188_12
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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11850..12953
DNA (1104bp) protein (368aa)
stage V sporulation protein E; K03588 cell division protein FtsW id=14631596 bin=bin9_gal15 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
stage V sporulation protein E; K03588 cell division protein FtsW Tax=CSP1_3_Armatimonadetes
stage V sporulation protein E
13_1_40cm_scaffold_188_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

12968..14116
DNA (1149bp) protein (383aa)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=24441562 bin=RBG_19FT_COMBO_GAL15_69_19 species=Selenomonas artemidis genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine tr
13_1_40cm_scaffold_188_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

14113..15540
DNA (1428bp) protein (476aa)
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=24441563 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
murC; UDP-N-acetylmuramate--L-alanine ligase
13_1_40cm_scaffold_188_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

15540..16469
DNA (930bp) protein (310aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] id=24441564 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
13_1_40cm_scaffold_188_16
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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16519..17343
DNA (825bp) protein (275aa)
polypeptide-transport-associated domain-containing protein; K03589 cell division protein FtsQ id=24441565 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
polypeptide-transport-associated domain-containing protein; K03589 cell division protein FtsQ Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
polypeptide-transport-associated domain-containing protein FtsQ-type
13_1_40cm_scaffold_188_17
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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17474..18709
DNA (1236bp) protein (412aa)
cell division protein FtsA id=24441566 bin=RBG_19FT_COMBO_GAL15_69_19 species=Spiribacter salinus genus=Spiribacter taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
cell division protein FtsA Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
cell division protein FtsA
13_1_40cm_scaffold_188_18
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

18769..19827
DNA (1059bp) protein (353aa)
FtsZ; cell division protein FtsZ; K03531 cell division protein FtsZ id=24441567 bin=RBG_19FT_COMBO_GAL15_69_19 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FtsZ; cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
FtsZ; cell division protein FtsZ
13_1_40cm_scaffold_188_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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19928..21004
DNA (1077bp) protein (359aa)
metalloprotease Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
metalloprotease id=24441568 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermococcus litoralis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase M50 family
13_1_40cm_scaffold_188_20
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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21007..21501
DNA (495bp) protein (165aa)
abc-type na+ efflux pump permease component-like protein; K09696 sodium transport system permease protein id=24441569 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
abc-type na+ efflux pump permease component-like protein; K09696 sodium transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
sodium extrusion protein NatB
Displaying 20 items

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