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13_1_40cm_scaffold_2126

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2126_1
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1..456)
DNA (456bp) protein (152aa)
dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein id=4103832 bin=GWF2_Lentisphaerae_57_35 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
NAD-dependent epimerase/dehydratase Tax=GWF2_Lentisphaerae_57_35_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_2126_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(530..2785)
DNA (2256bp) protein (752aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RBG_16_Anaeromyxobacter_69_14_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IC58_9CHLR
13_1_40cm_scaffold_2126_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2796..3875)
DNA (1080bp) protein (360aa)
Glycosyl transferase group 1 n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QE38_DESB2
group 1 glycosyl transferase Tax=RBG_16_Nitrospirae_64_22_curated
group 1 glycosyl transferase
13_1_40cm_scaffold_2126_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3946..5133
DNA (1188bp) protein (396aa)
putative UDP-glucose/GDP-mannose dehydrogenase; K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-] Tax=RBG_16_RIF_CHLX_72_14_curated
Putative UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H263_ACTM4
putative UDP-glucose/GDP-mannose dehydrogenase
13_1_40cm_scaffold_2126_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5208..6152
DNA (945bp) protein (315aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E6J2_9FIRM
NAD-dependent epimerase/dehydratase Tax=RBG_16_RIF_CHLX_72_14_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_2126_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

6116..6880
DNA (765bp) protein (255aa)
glycosyl transferase (EC:2.4.1.83) Tax=RBG_16_RIF_CHLX_70_13_curated
Glycosyl transferase family 2 n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I598_MYCRH
glycosyl transferase
13_1_40cm_scaffold_2126_7
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6861..7889)
DNA (1029bp) protein (343aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; R
dTDP-glucose 4,6-dehydratase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTQ0_ROSS1
dTDP-glucose 4,6-dehydratase
13_1_40cm_scaffold_2126_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7902..8369)
DNA (468bp) protein (156aa)
dTDP-4-dehydrorhamnose 3 5-epimerase-like protein; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Chloroflexi_68_14_curated
SpsL id=3290784 bin=GWF2_Planctomycete_41_51 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
dTDP-4-dehydrorhamnose 3,5 epimerase
13_1_40cm_scaffold_2126_9
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(8366..9112)
DNA (747bp) protein (249aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=7200681 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
nucleotidyl transferase Tax=CG_Arma_02
13_1_40cm_scaffold_2126_10
unknown

Not on your lists

9156..9539
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_scaffold_2126_11
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9583..10695
DNA (1113bp) protein (371aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=351607 species="Bacteria; Actinobacteria; Aci
DNA polymerase IV n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUV6_ACIC1
13_1_40cm_scaffold_2126_12
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10511..11374)
DNA (864bp) protein (288aa)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:AEI11947.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEI11947.1};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulom
DNA polymerase III, epsilon subunit n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A3P4_CELGA
DNA polymerase III, epsilon subunit
13_1_40cm_scaffold_2126_13
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(11371..12738)
DNA (1368bp) protein (456aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U8I5_9EURY
putative polysaccharide biosynthesis protein Tax=RBG_13_Chloroflexi_54_9_curated
polysaccharide biosynthesis protein
13_1_40cm_scaffold_2126_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

12974..13774
DNA (801bp) protein (267aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RBG_16_RIF_CHLX_69_14_curated
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase id=3440871 bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_scaffold_2126_15
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13798..14334
DNA (537bp) protein (179aa)
(2Fe-2S)-binding protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028A2193
[Fe-S]-binding protein {ECO:0000313|EMBL:KJK33510.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noca
FAD dependent oxidoreductase
13_1_40cm_scaffold_2126_16
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14367..15032
DNA (666bp) protein (222aa)
Menaquinone-cytochrome c reductase, cytochrome B subunit n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9G5T8_9BACL
Cytochrome b6 {ECO:0000313|EMBL:GAK40028.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
cytochrome b/b6 protein
13_1_40cm_scaffold_2126_17
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15032..15721
DNA (690bp) protein (230aa)
menaquinol:cytochrome c oxidoreductase-like protein n=2 Tax=Paenibacillus larvae RepID=UPI0001F85B30
qcrC; menaquinol-cytochrome c reductase cytochrome b/c subunit QcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit QcrC {ECO:0000313|EMBL:AHD05213.1}; TaxID=697284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source=
13_1_40cm_scaffold_2126_18
unknown

Not on your lists

comp(15734..16015)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_scaffold_2126_19
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16150..16698)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AJL5_9BACT
conserved membrane protein of unknown function Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_40cm_scaffold_2126_20
RBG_13_OP11_Woesebacteria_46_13_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(16695..17636)
DNA (942bp) protein (314aa)
hypothetical protein Tax=RBG_13_OP11_Woesebacteria_46_13_curated
hypothetical protein id=5801211 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
13_1_40cm_scaffold_2126_21
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17700..18059
DNA (360bp) protein (120aa)
thioredoxin n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375E511
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
thioredoxin
13_1_40cm_scaffold_2126_22

Not on your lists

comp(18302..18679)
DNA (378bp) protein (126aa)
nitrogen regulatory protein P-II n=1 Tax=Zavarzinella formosa RepID=UPI0002E24F17
Uncharacterized protein {ECO:0000313|EMBL:KKL07539.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitrogen regulatory protein P-II
13_1_40cm_scaffold_2126_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18676..20106)
DNA (1431bp) protein (477aa)
Ammonium transporter n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F545_CONWI
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woes
13_1_40cm_scaffold_2126_24
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

20384..21829
DNA (1446bp) protein (482aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexa
Glutamine synthetase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKH1_ROSCS
glutamine synthetase, type I
13_1_40cm_scaffold_2126_25
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21965..23788)
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00037C7A09
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KIH97903.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
GAF domain-containing protein
13_1_40cm_scaffold_2126_26
unknown

Not on your lists

23942..24379
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_scaffold_2126_27
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

24503..24691
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EED2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83044.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
13_1_40cm_scaffold_2126_28
unknown

Not on your lists

24696..24941
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_2126_29
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

24938..26671
DNA (1734bp) protein (578aa)
Cellulase (Glycosyl hydrolase family 5) subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GY69_ACACA
Cellulase (Glycosyl hydrolase family 5) subfamily protein {ECO:0000313|EMBL:ELR17897.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeb
glycosidase
13_1_40cm_scaffold_2126_30
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26790..27662
DNA (873bp) protein (291aa)
ABC transporter related protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEZ2_RHOM4
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY47442.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;
Displaying 30 items

View Taxonomy