ggKbase home page

13_1_40cm_scaffold_1266

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1266_1
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..575)
DNA (573bp) protein (191aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:ABC20253.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABC20253.1};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moor
Aminotransferase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH36_MOOTA
13_1_40cm_scaffold_1266_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(586..1350)
DNA (765bp) protein (255aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA25894.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA25894.1};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJN4_PSEUX
13_1_40cm_scaffold_1266_3
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(1368..2939)
DNA (1572bp) protein (524aa)
Extracellular solute-binding protein family 5 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEG0_9CHLR
putative ABC transporter substrate binding protein Tax=RBG_13_Chloroflexi_54_9_curated
family 5 extracellular solute-binding protein
13_1_40cm_scaffold_1266_4
unknown

Not on your lists

comp(2978..3157)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_1266_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3164..3766)
DNA (603bp) protein (201aa)
Superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WSQ9_KYRT2
13_1_40cm_scaffold_1266_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3818..4552)
DNA (735bp) protein (245aa)
phosphoglycerate mutase (EC:5.4.2.1); K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_16_Actinobacteria_67_10_curated
phosphoglycerate mutase (EC:5.4.2.4)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Desulfovibrio vulgaris RepID=GPMA_DESVH
13_1_40cm_scaffold_1266_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4572..5366)
DNA (795bp) protein (265aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase id=3025560 bin=GWC1_CPR2_39_9 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
13_1_40cm_scaffold_1266_8
Thermoflexus hugenholtzii, Thermoflexus, Thermoflexales, Thermoflexia, Chloroflexi, Bacteria

Not on your lists

comp(5375..6493)
DNA (1119bp) protein (373aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=877466 species="Bacteria;
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=bacterium JAD2 RepID=S4X357_9CHLR
13_1_40cm_scaffold_1266_9
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6538..7545)
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veil
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NJR1_9FIRM
13_1_40cm_scaffold_1266_10
Selenomonas sp. oral taxon 149, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7622..8509)
DNA (888bp) protein (296aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Selenomonas sp. oral taxon 149 str. 67H29BP RepID=E0P2B2_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=864563 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillone
sporulation transcription regulator whiA
13_1_40cm_scaffold_1266_11
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8598..9506
DNA (909bp) protein (303aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:ABY34910.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ABY34910.1};; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflex
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=2 Tax=Chloroflexus RepID=A9WCB9_CHLAA
13_1_40cm_scaffold_1266_12
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9514..10482
DNA (969bp) protein (323aa)
Transketolase central region n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GCD9_CHLAD
transketolase
Transketolase central region {ECO:0000313|EMBL:ACL24983.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chlorof
13_1_40cm_scaffold_1266_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

10556..11671
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00037E03EB
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ACZ37966.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaero
13_1_40cm_scaffold_1266_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11668..13527
DNA (1860bp) protein (620aa)
universal stress protein UspA n=1 Tax=Patulibacter americanus RepID=UPI0003B30884
Amino acid permease-associated region {ECO:0000313|EMBL:EHN08964.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="P
UspA domain-containing protein
13_1_40cm_scaffold_1266_15
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13651..14607)
DNA (957bp) protein (319aa)
Hypothetical conserved protein id=4480146 bin=GWC2_Elusimicrobia_64_44 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
epimerase Tax=GWC2_Elusimicrobia_64_44_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_1266_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14604..15278)
DNA (675bp) protein (225aa)
UPF0042 nucleotide-binding protein YM304_21660 n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AMG7_9ACTN
hypothetical protein; K06958 UPF0042 nucleotide-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_40cm_scaffold_1266_17
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15275..17125)
DNA (1851bp) protein (617aa)
UvrABC system protein C n=1 Tax=Thermincola potens (strain JR) RepID=D5XCB3_THEPJ
excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
13_1_40cm_scaffold_1266_18
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17163..17531
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037F57C0
hypothetical protein
Tax=BJP_IG2157_Actinomycetales_63_19
13_1_40cm_scaffold_1266_19
unknown

Not on your lists

comp(17435..17656)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_scaffold_1266_20
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17766..17966
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00038170DD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH36542.1}; TaxID=234621 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NB
13_1_40cm_scaffold_1266_21
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17955..18758)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YX01_METPS
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AJC60385.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
13_1_40cm_scaffold_1266_22
unknown

Not on your lists

18904..19143
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_scaffold_1266_23
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19140..20363)
DNA (1224bp) protein (408aa)
Tiorf27 protein n=1 Tax=Rhizobium radiobacter RepID=Q9R6N2_RHIRD
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
major Facilitator Superfamily protein
13_1_40cm_scaffold_1266_24
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20302..23127)
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM04_THEM7
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit A
13_1_40cm_scaffold_1266_25
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23140..23541)
DNA (402bp) protein (134aa)
thioesterase n=1 Tax=Streptomyces rapamycinicus RepID=UPI000383193A
HGG motif-containing thioesterase, possiblyinvolved in aromatic compounds catabolism {ECO:0000313|EMBL:CDR16398.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
thioesterase
13_1_40cm_scaffold_1266_26
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(23534..23959)
DNA (426bp) protein (142aa)
hypothetical protein id=14627394 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_1266_27
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23956..26037)
DNA (2082bp) protein (694aa)
UvrABC system protein B n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYL6_PELTS
UvrB; excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
13_1_40cm_scaffold_1266_28
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(26217..27431)
DNA (1215bp) protein (405aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G9U7_CHLAD
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ACL24462.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;"
13_1_40cm_scaffold_1266_29
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

comp(27448..29721)
DNA (2274bp) protein (758aa)
Macrolide export ATP-binding/permease protein MacB id=3114414 bin=GWC1_CPR2_39_9 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:KKQ95443.1}; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_1
macB; macrolide export ATP-binding protein/permease MacB
13_1_40cm_scaffold_1266_30
Culex quinquefasciatus, Culex, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(29764..30096)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0X824_CULQU
Putative uncharacterized protein {ECO:0000313|EMBL:EDS42293.1}; TaxID=7176 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocer
hypothetical protein
Displaying items 1-30 of 33 in total

View Taxonomy