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13_1_40cm_scaffold_1293

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1293_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1..603
DNA (603bp) protein (201aa)
FAD dependent oxidoreductase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIJ7_RHOM4
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACY48305.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
13_1_40cm_scaffold_1293_2
RLO_PLX_64_10, Bacteria

Not on your lists

comp(596..1069)
DNA (474bp) protein (158aa)
peptidase M19 renal dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
peptidase M19 n=1 Tax=Schlesneria paludicola RepID=UPI00029A2188
peptidase M19
13_1_40cm_scaffold_1293_3
unknown

Not on your lists

comp(1461..1985)
DNA (525bp) protein (175aa)

This feature has no annotations

13_1_40cm_scaffold_1293_4
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2031..2591
DNA (561bp) protein (187aa)
MarR family transcriptional regulator n=3 Tax=Amycolatopsis mediterranei RepID=D8I476_AMYMU
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AEK41769.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis medit
13_1_40cm_scaffold_1293_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2588..4177
DNA (1590bp) protein (530aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIC9_THET1
putative drug transport protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_scaffold_1293_6
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

4296..4580
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TNK3_9CHLR
putative zinc-binding domain-containing protein Tax=RBG_13_Chloroflexi_54_8_curated
hypothetical protein
13_1_40cm_scaffold_1293_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4677..5291)
DNA (615bp) protein (205aa)
Cyclase family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7E6_SPHTD
cyclase family protein
Cyclase family protein {ECO:0000313|EMBL:ACZ39792.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source
13_1_40cm_scaffold_1293_8
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5470..5766)
DNA (297bp) protein (99aa)
Translation initiation factor IF-1 n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2G8M6_DESGI
infA; putative translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" so
13_1_40cm_scaffold_1293_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5780..6697)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCD4_MYXSD id=5224704 bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_40cm_scaffold_1293_10
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6722..7099
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI000381FE68
Deazaflavin-dependent nitroreductase {ECO:0000313|EMBL:KIE36904.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripote
hypothetical protein
13_1_40cm_scaffold_1293_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7106..7987)
DNA (882bp) protein (294aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XUI0_9ACTO
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:EON23017.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.
phospholipid/glycerol acyltransferase
13_1_40cm_scaffold_1293_12
unknown

Not on your lists

comp(7984..8625)
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_40cm_scaffold_1293_13
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8622..10199)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036737D9
Uncharacterized protein {ECO:0000313|EMBL:KJF17101.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxida
hypothetical protein
13_1_40cm_scaffold_1293_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10199..11287)
DNA (1089bp) protein (363aa)
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AU73_RUBXD
zinc-binding alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABG05055.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobact
13_1_40cm_scaffold_1293_15
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11374..13734)
DNA (2361bp) protein (787aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AMQ1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KIE50894.1}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
hypothetical protein
13_1_40cm_scaffold_1293_16
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(13772..14854)
DNA (1083bp) protein (361aa)
Peptidase M23B n=2 Tax=Chloroflexus RepID=A9WJ55_CHLAA
peptidase M23
Peptidase M23B {ECO:0000313|EMBL:ABY34332.1}; Flags: Precursor;; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Ch
13_1_40cm_scaffold_1293_17
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14919..15968
DNA (1050bp) protein (350aa)
alcohol dehydrogenase Tax=CG_Delta_02
Alcohol dehydrogenase zinc-binding domain protein id=4965543 bin=GWA2_Deltaproteo_65_63 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
NADPH:quinone reductase and related Zn-dependent oxidoreductase
13_1_40cm_scaffold_1293_18
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(16077..16769)
DNA (693bp) protein (231aa)
Iron (Metal) dependent repressor, DtxR family id=4169028 bin=GWC2_Methylomirabilis_70_16 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
troR; DtxR family iron (metal) dependent repressor
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_scaffold_1293_19
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16792..17580
DNA (789bp) protein (263aa)
Putative metal cation transporter n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA73_NAKMY
ZIP family zinc transporter {ECO:0000313|EMBL:EWM18832.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
metal cation transporter
13_1_40cm_scaffold_1293_20
unknown

Not on your lists

comp(17577..17921)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_scaffold_1293_21
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

18006..18512
DNA (507bp) protein (169aa)
NUDIX hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B39127
NUDIX hydrolase Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
NUDIX hydrolase
13_1_40cm_scaffold_1293_22
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18457..19419)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AJ84_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN48500.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resin
13_1_40cm_scaffold_1293_23
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(19643..20344)
DNA (702bp) protein (234aa)
Cytochrome c assembly protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3M8_SPHTD
cytochrome c assembly protein
Cytochrome c assembly protein {ECO:0000313|EMBL:ACZ38845.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
13_1_40cm_scaffold_1293_24
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(20337..21002)
DNA (666bp) protein (222aa)
cytochrome c-type biogenesis protein CcmB; K02194 heme exporter protein B Tax=RBG_16_Chloroflexi_56_11_curated
cytochrome c-type biogenesis protein CcmB; K02194 heme exporter protein B id=14426404 bin=bin1_lowGC species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
cytochrome c-type biogenesis protein CcmB
13_1_40cm_scaffold_1293_25
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21002..21646)
DNA (645bp) protein (215aa)
ABC transporter ATP-binding protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RL3_SYMTH
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAD39680.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium
13_1_40cm_scaffold_1293_26
unknown

Not on your lists

comp(21643..21747)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_scaffold_1293_27
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(21744..23420)
DNA (1677bp) protein (559aa)
Cytochrome c assembly protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3N3_SPHTD
cytochrome c assembly protein
Cytochrome c assembly protein {ECO:0000313|EMBL:ACZ38850.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteracea
Displaying 27 items

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