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13_1_40cm_scaffold_3656

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3656_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1..774)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0R7_CORCM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_3656_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(774..1457)
DNA (684bp) protein (228aa)
major facilitator superfamily protein; K08225 MFS transporter, ENTS family, enterobactin (siderophore) exporter Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Major facilitator superfamily MFS_1 id=2116040 bin=GWD2_Deltaproteobacteria_55_8 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily MFS_1
13_1_40cm_scaffold_3656_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1400..1963)
DNA (564bp) protein (188aa)
major facilitator superfamily protein; K08225 MFS transporter, ENTS family, enterobactin (siderophore) exporter Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein id=24416836 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
multidrug-efflux transporter
13_1_40cm_scaffold_3656_4
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1968..2483)
DNA (516bp) protein (172aa)
hypothetical protein Tax=RBG_16_Actinobacteria_70_17_curated
Predicted membrane protein id=24527213 bin=RBG_19FT_COMBO_GAL15_69_19 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_scaffold_3656_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2488..3096)
DNA (609bp) protein (203aa)
RIO-like kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TGB2_9CHLR
RIO-like kinase Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_40cm_scaffold_3656_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3334..4320)
DNA (987bp) protein (329aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Cell wall hydrolase/autolysin n=2 Tax=Chloroflexus RepID=A9WIL9_CHLAA
cell wall hydrolase/autolysin
13_1_40cm_scaffold_3656_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4310..5293)
DNA (984bp) protein (328aa)
Sulfite oxidase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MWK8_HALMO
Sulfite oxidase {ECO:0000313|EMBL:EMA48825.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
molybdopterin binding oxidoreductase
13_1_40cm_scaffold_3656_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

5335..6363
DNA (1029bp) protein (343aa)
Oxidoreductase, molybdopterin binding {ECO:0000313|EMBL:CCF84890.1}; EC=1.8.3.1 {ECO:0000313|EMBL:CCF84890.1};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Spha
nitrate reductase (NADH) (EC:1.7.1.1)
Oxidoreductase, molybdopterin binding n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJM8_9CHLR
13_1_40cm_scaffold_3656_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6360..7397)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBE3_THET1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_40cm_scaffold_3656_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7538..8584)
DNA (1047bp) protein (349aa)
Putative glycosylase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EIC8_THECK
glycosylase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glycosylase
13_1_40cm_scaffold_3656_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8581..8988)
DNA (408bp) protein (136aa)
glycosyl transferase group 1 protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Glycosyltransferase id=24550729 bin=RBG_19FT_COMBO_GAL15_69_19 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
group 1 glycosyl transferase
13_1_40cm_scaffold_3656_12
unknown

Not on your lists

9434..9847
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_scaffold_3656_13
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9844..11196)
DNA (1353bp) protein (451aa)
hypothetical protein id=14624180 bin=bin5_DeltaP species=Amycolatopsis sp. ATCC 39116 genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein Tax=CSP1_8_Deltaproteobacteria
rhodanese-related sulfurtransferase
13_1_40cm_scaffold_3656_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11204..11980)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJC2_9CHLR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_3656_15
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12138..12455)
DNA (318bp) protein (106aa)
Rhodanese-related sulfurtransferase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ES92_MODMB
Rhodanese-related sulfurtransferase
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:CCH86255.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter mari
13_1_40cm_scaffold_3656_16
unknown

Not on your lists

12485..12697
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_3656_17

Not on your lists

12772..13653
DNA (882bp) protein (294aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA15716.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_scaffold_3656_18
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13737..14474
DNA (738bp) protein (246aa)
DNA-binding response regulator MtrA n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PGP3_9ACTO
DNA-binding response regulator MtrA {ECO:0000313|EMBL:EKY14791.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
13_1_40cm_scaffold_3656_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14410..15525)
DNA (1116bp) protein (372aa)
phospho-2-dehydro-3-deoxyheptonate aldolase; K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=GWA2_Rokubacteria_73_35_curated
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXF1_RUBXD
13_1_40cm_scaffold_3656_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15544..16059
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W724_9MICO
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
carbonic anhydrase
13_1_40cm_scaffold_3656_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16161..17585
DNA (1425bp) protein (475aa)
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3] id=24471114 bin=RBG_19FT_COMBO_GAL15_69_19 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hutH; hypothetical protein
13_1_40cm_scaffold_3656_22
unknown

Not on your lists

comp(17651..17833)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_scaffold_3656_23
unknown

Not on your lists

comp(17830..19485)
DNA (1656bp) protein (552aa)

This feature has no annotations

13_1_40cm_scaffold_3656_24
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(19944..20771)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Q7_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38874.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
Displaying 24 items

View Taxonomy