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13_1_40cm_scaffold_6721

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6721_1
unknown

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comp(2..1042)
DNA (1041bp) protein (347aa)

This feature has no annotations

13_1_40cm_scaffold_6721_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1069..1716
DNA (648bp) protein (216aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_scaffold_6721_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1801..2217
DNA (417bp) protein (139aa)
Putative Glycosyl hydrolase, family 13 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDN4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13 domain protein
13_1_40cm_scaffold_6721_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2217..2885
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA76_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92076.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_6721_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3000..4037
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92075.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_6721_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4034..5224)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60981.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
major facilitator superfamily protein
13_1_40cm_scaffold_6721_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5236..6042)
DNA (807bp) protein (269aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVR2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NGG1p interacting factor 3 protein, NIF3
13_1_40cm_scaffold_6721_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6145..6555)
DNA (411bp) protein (137aa)
Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWY1_SOLCM
Integral membrane protein CcmA involved in cell shape determination Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Integral membrane protein CcmA involved in cell shape determination
13_1_40cm_scaffold_6721_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6557..7345)
DNA (789bp) protein (263aa)
Cell wall endopeptidase, family M23/M37 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M23 id=7202088 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
peptidase M23B
13_1_40cm_scaffold_6721_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7342..8238)
DNA (897bp) protein (299aa)
Chromosome partitioning protein ParB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J2_GEMAT
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family Tax=GWC2_Gemmatimonadetes_71_10_curated
parB-like partition protein
13_1_40cm_scaffold_6721_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8235..9071)
DNA (837bp) protein (279aa)
Chromosome (Plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PI99_9DELT
parA; chromosome partitioning protein ParA; K03496 chromosome partitioning protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cobyrinic acid ac-diamide synthase
13_1_40cm_scaffold_6721_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9207..9416)
DNA (210bp) protein (70aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003123408
gidA; glucose-inhibited division protein A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
Displaying 12 items

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