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13_1_40cm_scaffold_18938

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_18938_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

17..850
DNA (834bp) protein (278aa)
lepB; signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG74_9BACT
13_1_40cm_scaffold_18938_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

838..1758
DNA (921bp) protein (307aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-)
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG75_9BACT
13_1_40cm_scaffold_18938_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1751..2551
DNA (801bp) protein (267aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG76_9BACT
13_1_40cm_scaffold_18938_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2552..3532
DNA (981bp) protein (327aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG77_9BACT
13_1_40cm_scaffold_18938_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3710..4027
DNA (318bp) protein (106aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG77_9BACT
13_1_40cm_scaffold_18938_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4063..4935
DNA (873bp) protein (291aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG78_9BACT
13_1_40cm_scaffold_18938_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4896..5798
DNA (903bp) protein (301aa)
kdsD; arabinose-5-phosphate isomerase (EC:5.3.1.13)
Arabinose-5-phosphate isomerase {ECO:0000313|EMBL:CBK42266.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CBK42266.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" sou
Arabinose-5-phosphate isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG79_9BACT
13_1_40cm_scaffold_18938_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5837..6457
DNA (621bp) protein (207aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_02_FULL_Ni
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG80_9BACT
13_1_40cm_scaffold_18938_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6523..6975
DNA (453bp) protein (151aa)
plsY; hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG81_9BACT
plsY; hypothetical protein
13_1_40cm_scaffold_18938_10
unknown

Not on your lists

comp(7000..7581)
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_40cm_scaffold_18938_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7804..8430
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG82_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_scaffold_18938_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8466..9857
DNA (1392bp) protein (464aa)
degP3; serine protease do (EC:3.4.21.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
degP3; serine protease do (EC:3.4.21.-)
Serine protease do n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG83_9BACT
13_1_40cm_scaffold_18938_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9741..11918)
DNA (2178bp) protein (726aa)
Elongation factor G (EF-G) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG84_9BACT
fusA; elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fusA; elongation factor G
13_1_40cm_scaffold_18938_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11929..12642)
DNA (714bp) protein (238aa)
UPF0301 protein NIDE3217 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI23_9BACT
hypothetical protein; K07735 putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_scaffold_18938_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(12703..13512)
DNA (810bp) protein (270aa)
DNA repair protein RadC homolog n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG85_9BACT
radC2; DNA repair protein RadC-like protein; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
radC2; DNA repair protein RadC-like protein
13_1_40cm_scaffold_18938_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13676..13873
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG86_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_scaffold_18938_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14104..14676
DNA (573bp) protein (191aa)
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52)
Putative Ribosomal RNA small subunit methyltransferase D n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG87_9BACT
13_1_40cm_scaffold_18938_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14673..15161
DNA (489bp) protein (163aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG88_9BACT
13_1_40cm_scaffold_18938_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15158..16351
DNA (1194bp) protein (398aa)
aspC; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG89_9BACT
13_1_40cm_scaffold_18938_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16723..17103)
DNA (381bp) protein (127aa)
Putative Murein lipoprotein (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG92_9BACT
putative murein lipoprotein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative murein lipoprotein
13_1_40cm_scaffold_18938_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(17193..17762)
DNA (570bp) protein (190aa)
Putative dsRNA-binding protein, predicted ribosome maturation factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG93_9BACT
putative dsRNA-binding protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative dsRNA-binding protein
13_1_40cm_scaffold_18938_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(17806..18075)
DNA (270bp) protein (90aa)
purD; phosphoribosylamine-glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
phosphoribosylamine--glycine ligase n=1 Tax=Cohnella laeviribosi RepID=UPI000380F4B7
purD; phosphoribosylamine--glycine ligase
Displaying 22 items

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