ggKbase home page

13_1_40cm_scaffold_2435

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2435_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2..772
DNA (771bp) protein (257aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC8_9BACT
13_1_40cm_scaffold_2435_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

772..1068
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC9_9BACT
hypothetical protein; K02221 YggT family protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_scaffold_2435_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1081..1587
DNA (507bp) protein (169aa)
Putative Cell division protein DivIVA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD0_9BACT
putative cell division protein DivIVA
Putative Cell division protein DivIVA {ECO:0000313|EMBL:CBK40539.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_scaffold_2435_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1767..2876
DNA (1110bp) protein (370aa)
Putative Esterase, beta-lactamase family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD1_9BACT
putative esterase, beta-lactamase family Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative esterase, beta-lactamase family
13_1_40cm_scaffold_2435_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3033..3407)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_scaffold_2435_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3533..4069
DNA (537bp) protein (179aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_02_FULL_Ni
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD3_9BACT
13_1_40cm_scaffold_2435_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4268..5488
DNA (1221bp) protein (407aa)
Type IV pilus biogenesis protein PilC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD5_9BACT
pilC; type IV pilus biogenesis protein PilC
Type IV pilus biogenesis protein PilC {ECO:0000313|EMBL:CBK40544.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_scaffold_2435_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

5655..7346
DNA (1692bp) protein (564aa)
putative sensor protein PilS (EC:2.7.13.3); K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative sensor protein PilS (EC:2.7.13.3)
Putative Sensor protein PilS n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD6_9BACT
13_1_40cm_scaffold_2435_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7331..8707
DNA (1377bp) protein (459aa)
Transcriptional regulatory protein pilR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD7_9BACT
pilR; transcriptional regulatory protein pilR
Transcriptional regulatory protein pilR {ECO:0000313|EMBL:CBK40546.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.
13_1_40cm_scaffold_2435_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8751..9740
DNA (990bp) protein (330aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD8_9BACT
13_1_40cm_scaffold_2435_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9789..10343
DNA (555bp) protein (185aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD9_9BACT
13_1_40cm_scaffold_2435_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10340..10672
DNA (333bp) protein (111aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD9_9BACT
13_1_40cm_scaffold_2435_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


10793..11080
DNA (288bp) protein (96aa)
50S ribosomal protein L25 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBE0_9BACT
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=330214 sp
13_1_40cm_scaffold_2435_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


11056..11565
DNA (510bp) protein (170aa)
50S ribosomal protein L25 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBE0_9BACT
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rplY; 50S ribosomal protein L25
13_1_40cm_scaffold_2435_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11568..12155
DNA (588bp) protein (196aa)
pth; aminoacyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pth; aminoacyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBE1_9BACT
13_1_40cm_scaffold_2435_16
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12234..12338
DNA (105bp) protein (35aa)
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
Displaying 16 items

View Taxonomy