ggKbase home page

13_1_40cm_scaffold_2044

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2044_1
unknown

Not on your lists

2..1006
DNA (1005bp) protein (335aa)

This feature has no annotations

13_1_40cm_scaffold_2044_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1164..1907)
DNA (744bp) protein (248aa)
Outer membrane protein, OmpA/MotB family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILY1_KORVE
OmpA/MotB family outer membrane protein
Outer membrane protein, OmpA/MotB family {ECO:0000313|EMBL:ABF42119.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
13_1_40cm_scaffold_2044_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2150..2560)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8I1_9BACT
PilT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PilT protein domain-containing protein
13_1_40cm_scaffold_2044_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2557..2787)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8I2_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
13_1_40cm_scaffold_2044_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2840..3463
DNA (624bp) protein (208aa)
UvrABC system protein C n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=UVRC_KORVE
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=204669 species="Ba
13_1_40cm_scaffold_2044_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3406..4017
DNA (612bp) protein (204aa)
UvrABC system protein C n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=UVRC_ACIC5
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=240015 species="Ba
13_1_40cm_scaffold_2044_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3990..4559
DNA (570bp) protein (190aa)
UvrABC system protein C n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=UVRC_KORVE
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=204669 species="Ba
13_1_40cm_scaffold_2044_8
unknown

Not on your lists

4713..5135
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_scaffold_2044_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5077..5856)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP48_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41352.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_scaffold_2044_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5880..6794)
DNA (915bp) protein (305aa)
ATPase, BadF/BadG/BcrA/BcrD type n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL96_KORVE
BadF/BadG/BcrA/BcrD type ATPase
ATPase, BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:ABF42354.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_1_40cm_scaffold_2044_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6894..8339
DNA (1446bp) protein (482aa)
SSS sodium solute transporter superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL97_KORVE
SSS family solute/sodium (Na+) symporter
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ABF42353.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_scaffold_2044_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8336..9697
DNA (1362bp) protein (454aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL98_KORVE
amino acid transporter
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABF42352.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.
13_1_40cm_scaffold_2044_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9925..10917
DNA (993bp) protein (331aa)
TonB-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILN5_KORVE
TonB-like protein
TonB-like protein {ECO:0000313|EMBL:ABF42215.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Elli
13_1_40cm_scaffold_2044_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10975..12699
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363603F
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABF42216.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_scaffold_2044_15
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12783..13097)
DNA (315bp) protein (105aa)
Peptidase S41 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NU29_GRAMM
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:AEU38664.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (stra
13_1_40cm_scaffold_2044_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(13045..16254)
DNA (3210bp) protein (1070aa)
hypothetical protein id=8266101 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Uncharacterized protein, periplasmic component of the Tol biopolymer transport system like protein {ECO:0000313|EMBL:AEP11086.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivisi
13_1_40cm_scaffold_2044_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16254..17258)
DNA (1005bp) protein (335aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=234267 species="Bacteria; Acidobacteria; Soli
DNA polymerase IV n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AR7_SOLUE
Displaying 17 items

View Taxonomy