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13_1_40cm_scaffold_4122

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4122_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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228..1139
DNA (912bp) protein (304aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPE1_KORVE
phosphoribosylaminoimidazolesuccinocarboxamide synthase
13_1_40cm_scaffold_4122_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1167..1718
DNA (552bp) protein (184aa)
Colicin V production protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPE0_KORVE
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:ABF41260.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kori
13_1_40cm_scaffold_4122_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1777..2055
DNA (279bp) protein (93aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD9_KORVE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABF41261.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_1_40cm_scaffold_4122_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2123..3496)
DNA (1374bp) protein (458aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD8_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41262.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_scaffold_4122_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3806..4534
DNA (729bp) protein (243aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD7_KORVE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABF41263.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_1_40cm_scaffold_4122_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5166..5477
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD5_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41265.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_scaffold_4122_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5517..6020
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41266.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_scaffold_4122_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6017..6967)
DNA (951bp) protein (317aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MNMA_KORVE
mnmA; tRNA-specific 2-thiouridylase MnmA
13_1_40cm_scaffold_4122_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6919..7080)
DNA (162bp) protein (54aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037DCF76
mnmA; tRNA-specific 2-thiouridylase MnmA
13_1_40cm_scaffold_4122_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7126..8301)
DNA (1176bp) protein (392aa)
Aminotransferase, class V n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPC4_KORVE
class V aminotransferase
Aminotransferase, class V {ECO:0000313|EMBL:ABF41276.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
13_1_40cm_scaffold_4122_11
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8386..8604)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K864_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ27059.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
13_1_40cm_scaffold_4122_12
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8927..10000)
DNA (1074bp) protein (358aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Citrate synthase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X2V4_ACISM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-
13_1_40cm_scaffold_4122_13
unknown

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comp(10189..10638)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_scaffold_4122_14
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10694..11050)
DNA (357bp) protein (119aa)
Tax=BJP_08E140C01_Syntrophobacterales_43_19
13_1_40cm_scaffold_4122_15
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11123..11533)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3D3_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD41974.1}; Flags: Precursor;; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nass
13_1_40cm_scaffold_4122_16
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11666..12043)
DNA (378bp) protein (126aa)
glyoxalase n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00035C11E8
glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase {ECO:0000313|EMBL:KIC67668.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
13_1_40cm_scaffold_4122_17
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(12219..12470)
DNA (252bp) protein (84aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URY5_ROSS1
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABU59830.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseifle
Displaying 17 items

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