ggKbase home page

13_1_40cm_scaffold_2391

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2391_1
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2..538
DNA (537bp) protein (179aa)
Major facilitator superfamily transporter n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDJ5_NITGG
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AIC15445.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_scaffold_2391_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(615..1469)
DNA (855bp) protein (285aa)
putative HAD-superfamily hydrolase, subfamily IIB
Putative HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:AIC15455.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;
13_1_40cm_scaffold_2391_3

Not on your lists

comp(2375..2710)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK91941.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_scaffold_2391_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2833..3171)
DNA (339bp) protein (113aa)
Putative response regulator receiver protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGZ6_NITGG
response regulator receiver protein
Putative response regulator receiver protein {ECO:0000313|EMBL:AFU59130.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" so
13_1_40cm_scaffold_2391_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3354..5183
DNA (1830bp) protein (610aa)
Signal transduction histidine kinase, with phosphoacceptor and ATP binding domain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICN3_NITGG
signal transduction histidine kinase, with phosphoacceptor and ATP binding domain
Signal transduction histidine kinase, with phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AFU59131.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nit
13_1_40cm_scaffold_2391_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5516..6448)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9V3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14808.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_scaffold_2391_7
unknown

Not on your lists

comp(7012..7125)
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_scaffold_2391_8
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

7343..8308
DNA (966bp) protein (322aa)
chemotaxis protein CheY n=1 Tax=Sporolactobacillus vineae RepID=UPI000288AAE7
cheY3; chemotaxis protein CheY
Tax=BJP_IG2102_Coriobacteriales_64_17
13_1_40cm_scaffold_2391_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8379..10331
DNA (1953bp) protein (651aa)
putative membrane associated signal transduction histidine kinase, with phosphoacceptor and ATP binding domain (EC:2.7.13.3)
Putative membrane associated signal transduction histidine kinase, with phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AIC16393.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AIC16393.1};; TaxID=926571 s
two component system histidine kinase id=129380 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
13_1_40cm_scaffold_2391_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10361..10666
DNA (306bp) protein (102aa)
Response regulator receiver protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCD8_9ARCH
putative Polar-differentiation response regulator divK
Putative Polar-differentiation response regulator divK {ECO:0000313|EMBL:AIC16394.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrosospha
13_1_40cm_scaffold_2391_11

Not on your lists

comp(10939..12489)
DNA (1551bp) protein (517aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK98073.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_scaffold_2391_12
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12437..13627)
DNA (1191bp) protein (397aa)
Pyrrolo-quinoline quinone n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAV0_9SPHN
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EGD58272.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
Pyrrolo-quinoline quinone
13_1_40cm_scaffold_2391_13
unknown

Not on your lists

13861..14538
DNA (678bp) protein (226aa)

This feature has no annotations

13_1_40cm_scaffold_2391_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14604..15005)
DNA (402bp) protein (134aa)
Putative response regulator receiver protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGZ6_NITGG
response regulator receiver protein
Putative response regulator receiver protein {ECO:0000313|EMBL:AFU59130.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" so
13_1_40cm_scaffold_2391_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15124..16095
DNA (972bp) protein (324aa)
rcsC; signal transduction histidine kinase, with phosphoacceptor and ATP binding domain (EC:2.7.3.-)
Signal transduction histidine kinase, with phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AFU57911.1}; EC=2.7.3.- {ECO:0000313|EMBL:AFU57911.1};; TaxID=1237085 species="Archaea; Thaumarchaeo
Signal transduction histidine kinase, with phosphoacceptor and ATP binding domain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I999_NITGG
Displaying 15 items

View Taxonomy