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13_1_40cm_scaffold_122

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_122_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3..782)
DNA (780bp) protein (260aa)
Arsenical resistance-3 family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE33_NITGG
arsenical resistance-3 family protein
Arsenical resistance-3 family protein {ECO:0000313|EMBL:AFU57078.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_scaffold_122_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(772..2580)
DNA (1809bp) protein (603aa)
pepF; oligoendopeptidase (EC:3.4.24.-)
Oligoendopeptidase, pepF/M3 family {ECO:0000313|EMBL:AFU57079.1}; EC=3.4.24.- {ECO:0000313|EMBL:AFU57079.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitros
Oligoendopeptidase, pepF/M3 family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILH2_NITGG
13_1_40cm_scaffold_122_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2689..3006
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC01_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57080.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_122_4
unknown

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comp(3020..3328)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_scaffold_122_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3549..4103)
DNA (555bp) protein (185aa)
RDD family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I736_NITGG
RDD family protein
RDD family protein {ECO:0000313|EMBL:AFU57081.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera garge
13_1_40cm_scaffold_122_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4174..5145)
DNA (972bp) protein (324aa)
SCP domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILH6_NITGG
SCP domain-containing protein
SCP domain-containing protein {ECO:0000313|EMBL:AFU57084.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososp
13_1_40cm_scaffold_122_7

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comp(5407..5895)
DNA (489bp) protein (163aa)
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
Hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:AIF10957.1}; TaxID=1456168 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3
beta-lactamase domain-containing protein
13_1_40cm_scaffold_122_8

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comp(5876..6031)
DNA (156bp) protein (52aa)
Ribonuclease J protein {ECO:0000313|EMBL:KFM18352.1}; EC=3.1.-.- {ECO:0000313|EMBL:KFM18352.1};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
13_1_40cm_scaffold_122_9

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comp(5974..6405)
DNA (432bp) protein (144aa)
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
Hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:AIF07181.1}; TaxID=1456093 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3
hypothetical protein
13_1_40cm_scaffold_122_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6745..7350)
DNA (606bp) protein (202aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16) rbh
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1237085 species="Archaea; Thaumarc
GTP cyclohydrolase 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC10_NITGG
13_1_40cm_scaffold_122_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7337..8074)
DNA (738bp) protein (246aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Archaeosine biosynthesis pro
Radical SAM domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I746_NITGG
radical SAM domain-containing protein
13_1_40cm_scaffold_122_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8031..8771)
DNA (741bp) protein (247aa)
queC1; 7-cyano-7-deazaguanine synthase (EC:6.3.-.-)
7-cyano-7-deazaguanine synthase {ECO:0000313|EMBL:AFU57092.1}; EC=6.3.-.- {ECO:0000313|EMBL:AFU57092.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososph
7-cyano-7-deazaguanine synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGZ1_NITGG
13_1_40cm_scaffold_122_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8793..9251)
DNA (459bp) protein (153aa)
Putative enolase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE49_NITGG
enolase
Putative enolase {ECO:0000313|EMBL:AFU57093.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargens
13_1_40cm_scaffold_122_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9359..10549
DNA (1191bp) protein (397aa)
GTP binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI1_NITGG
GTP binding protein
GTP binding protein {ECO:0000313|EMBL:AFU57094.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera garg
13_1_40cm_scaffold_122_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


10552..11544
DNA (993bp) protein (331aa)
Putative metalloendopeptidase glycoprotease family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC21_NITGG
metalloendopeptidase glycoprotease family
Putative metalloendopeptidase glycoprotease family {ECO:0000313|EMBL:AFU57095.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
13_1_40cm_scaffold_122_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11528..11845)
DNA (318bp) protein (106aa)
GRAM domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I751_NITGG
GRAM domain-containing protein
GRAM domain-containing protein {ECO:0000313|EMBL:AFU57096.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrosos
13_1_40cm_scaffold_122_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11882..12493
DNA (612bp) protein (204aa)
Putative Mn2+-dependent serine/threonine protein kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH02_NITGG
Mn2+-dependent serine/threonine protein kinase
Putative Mn2+-dependent serine/threonine protein kinase {ECO:0000313|EMBL:AFU57097.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososp
13_1_40cm_scaffold_122_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


12490..13044
DNA (555bp) protein (185aa)
Putative nucleoside-triphosphatase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE54_NITGG
nucleoside-triphosphatase
Putative nucleoside-triphosphatase {ECO:0000313|EMBL:AFU57098.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitr
13_1_40cm_scaffold_122_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13039..13998)
DNA (960bp) protein (320aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
Wyosine base formation domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI4_NITGG
wyosine base formation domain-containing protein
13_1_40cm_scaffold_122_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14131..14949
DNA (819bp) protein (273aa)
NIFsuperfamily domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC27_NITGG
NIFsuperfamily domain-containing protein rbh
NIFsuperfamily domain-containing protein {ECO:0000313|EMBL:AFU57100.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_scaffold_122_trna_1
unknown

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14991..15093
DNA (103bp)
transferRNA
13_1_40cm_scaffold_122_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15156..16001)
DNA (846bp) protein (282aa)
A2M superfamily domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH14_NITGG
A2M superfamily domain-containing protein
A2M superfamily domain-containing protein {ECO:0000313|EMBL:AFU57102.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
13_1_40cm_scaffold_122_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16244..16492
DNA (249bp) protein (83aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaeral
DNA-directed RNA polymerase subunit H n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE60_NITGG
13_1_40cm_scaffold_122_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16500..19850
DNA (3351bp) protein (1117aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososph
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILI7_NITGG
13_1_40cm_scaffold_122_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19865..23683
DNA (3819bp) protein (1273aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphae
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG
13_1_40cm_scaffold_122_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23658..23972
DNA (315bp) protein (105aa)
50S ribosomal protein L30e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0I766_NITGG
rpl30e; 50S ribosomal protein L30e
50S ribosomal protein L30e {ECO:0000313|EMBL:AFU57106.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
13_1_40cm_scaffold_122_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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24060..24533
DNA (474bp) protein (158aa)
Archaeal NusA family KH domain containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH19_NITGG
archaeal NusA family KH domain containing protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaer
13_1_40cm_scaffold_122_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


24526..24963
DNA (438bp) protein (146aa)
30S ribosomal protein S12 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IE68_NITGG
rps12p; 30S ribosomal protein S12p
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitr
13_1_40cm_scaffold_122_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


24960..25565
DNA (606bp) protein (202aa)
30S ribosomal protein S7 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILJ0_NITGG
rps7p; 30S ribosomal protein S7p
R-protein S7p {ECO:0000313|EMBL:ADK26002.1}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidat
13_1_40cm_scaffold_122_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

25674..26633
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC41_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57110.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
Displaying 30 items

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