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13_1_40cm_scaffold_1321

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1321_1
unknown

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comp(194..1453)
DNA (1260bp) protein (420aa)
type 3a cellulose-binding domain-containing protein
13_1_40cm_scaffold_1321_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1734..1946)
DNA (213bp) protein (71aa)
Putative signal transduction response regulator, receiver domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJQ8_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU60310.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphae
13_1_40cm_scaffold_1321_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2111..2530)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82246.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_scaffold_1321_4
unknown

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comp(2585..2743)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_scaffold_1321_5
unknown

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comp(3127..3306)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_1321_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3303..3572)
DNA (270bp) protein (90aa)
Zinc finger C2H2 domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II08_NITGG
zinc finger C2H2 domain-containing protein
Zinc finger C2H2 domain-containing protein {ECO:0000313|EMBL:AFU58568.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sour
13_1_40cm_scaffold_1321_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3606..4463)
DNA (858bp) protein (286aa)
prephenate dehydrogenase (EC:1.3.1.12) rbh
Putative prephenate dehydrogenase {ECO:0000313|EMBL:AFU58567.1}; EC=1.3.1.12 {ECO:0000313|EMBL:AFU58567.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitroso
Putative prephenate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJX0_NITGG
13_1_40cm_scaffold_1321_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4465..5847)
DNA (1383bp) protein (461aa)
aspC; aspartate aminotransferase (EC:2.6.1.1) rbh
Aspartate aminotransferase {ECO:0000313|EMBL:AFU58566.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AFU58566.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaerac
Aspartate aminotransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB67_NITGG
13_1_40cm_scaffold_1321_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5847..6956)
DNA (1110bp) protein (370aa)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFH5_NITGG
13_1_40cm_scaffold_1321_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6986..8287)
DNA (1302bp) protein (434aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) rbh
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN11_NITGG
13_1_40cm_scaffold_1321_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8280..9134)
DNA (855bp) protein (285aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00370}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00370};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00370};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitroso
Shikimate kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHZ8_NITGG
13_1_40cm_scaffold_1321_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9131..9910)
DNA (780bp) protein (260aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1237085 species="Archaea; Thaum
Shikimate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJW7_NITGG
13_1_40cm_scaffold_1321_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10161..10841)
DNA (681bp) protein (227aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB60_NITGG
13_1_40cm_scaffold_1321_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11040..11348)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFH2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58560.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_1321_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11453..11797
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN10_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58559.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_1321_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(11798..12100)
DNA (303bp) protein (101aa)
Flavin nucleotide binding protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV54_9ARCH
Flavin nucleotide binding protein {ECO:0000313|EMBL:CDI06427.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
flavin nucleotide binding protein
13_1_40cm_scaffold_1321_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12243..13094)
DNA (852bp) protein (284aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaer
Putative DNA methylase N-4/N-6 domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB54_NITGG
DNA methylase N-4/N-6 domain-containing protein
13_1_40cm_scaffold_1321_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13467..13814)
DNA (348bp) protein (116aa)
aroB; 3-dehydroquinate synthase (EC:1.-.-.- 4.2.3.4)
3-dehydroquinate synthase {ECO:0000313|EMBL:AFU58555.1}; EC=1.-.-.- {ECO:0000313|EMBL:AFU58555.1};; EC=4.2.3.4 {ECO:0000313|EMBL:AFU58555.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososp
3-dehydroquinate synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFG6_NITGG
Displaying 18 items

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