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13_1_40cm_scaffold_7812

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7812_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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2..1588
DNA (1587bp) protein (529aa)
ferredoxin--nitrite reductase (EC:1.7.7.1); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Ferredoxin--nitrite reductase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIR4_ANADF
ferredoxin--nitrite reductase
13_1_40cm_scaffold_7812_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1700..2785
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP23_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41377.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_scaffold_7812_3
unknown

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2953..3168
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_scaffold_7812_trna_1
unknown

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comp(3867..3951)
DNA (85bp)
transferRNA
13_1_40cm_scaffold_7812_4
unknown

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comp(4600..4917)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_scaffold_7812_5
unknown

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comp(5061..5420)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_scaffold_7812_6
unknown

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comp(6084..6437)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_scaffold_7812_7
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7227..8972
DNA (1746bp) protein (582aa)
sugar ABC transporter periplasmic sugar-binding protein (EC:4.3.1.3)
ABC transporter substrate-binding protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J0T8_9DELT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESQ07924.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; envir
13_1_40cm_scaffold_7812_8
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9036..10121
DNA (1086bp) protein (362aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBL8_9RHOB
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:EFO34105.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium
ABC transporter
13_1_40cm_scaffold_7812_9
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10205..11134
DNA (930bp) protein (310aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBL9_9RHOB
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:EFO34106.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium
sugar ABC transporter, ATP-binding protein
13_1_40cm_scaffold_7812_10
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11131..11997
DNA (867bp) protein (289aa)
binding-protein-dependent transport system inner membrane protein (EC:4.1.2.13)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BUT7_9RHIZ
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EIM73339.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
13_1_40cm_scaffold_7812_11
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11999..12799
DNA (801bp) protein (267aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBM1_9RHOB
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFO34108.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
carbohydrate ABC transporter permease
13_1_40cm_scaffold_7812_12
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12809..13105
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BUT9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM73341.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
hypothetical protein
13_1_40cm_scaffold_7812_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13109..13480)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGQ5_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27901.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; An
13_1_40cm_scaffold_7812_14
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13730..14113)
DNA (384bp) protein (128aa)
Mannose-1-phosphate guanylyltransferase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RWX9_9DELT
Cupin {ECO:0000313|EMBL:AKF81896.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02
cupin domain-containing protein
13_1_40cm_scaffold_7812_15
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14163..15461)
DNA (1299bp) protein (433aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MGB9_CORCM
serS; seryl-tRNA synthetase
13_1_40cm_scaffold_7812_16
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15517..16053
DNA (537bp) protein (179aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFJ7_ANASK
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:KFE71900.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacterace
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_scaffold_7812_17
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16044..16919)
DNA (876bp) protein (292aa)
Hsp33 family protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U0Q4_9DELT
heat shock protein 33
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
13_1_40cm_scaffold_7812_18
unknown

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16970..18604
DNA (1635bp) protein (545aa)

This feature has no annotations

13_1_40cm_scaffold_7812_19
unknown

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18892..19284
DNA (393bp) protein (131aa)

This feature has no annotations

Displaying 20 items

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