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13_1_40cm_scaffold_2194

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2194_trna_1
unknown

Not on your lists

comp(220..293)
DNA (74bp)
transferRNA
13_1_40cm_scaffold_2194_1
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(320..1594)
DNA (1275bp) protein (425aa)
histidine kinase Tax=RBG_13_RIF03_48_7_curated
Uncharacterized protein id=2284030 bin=GWB2_Nitrospirae_rel_47_37 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
atypical hybrid histidine kinase
13_1_40cm_scaffold_2194_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1578..3683)
DNA (2106bp) protein (702aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ6_KORVE
PAS/PAC sensor signal transduction histidine kinase
13_1_40cm_scaffold_2194_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3702..3977)
DNA (276bp) protein (92aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
Gas vesicle structural protein
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" sourc
13_1_40cm_scaffold_2194_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3983..4303)
DNA (321bp) protein (107aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ4_KORVE
gas vesicle protein GVPa Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle protein GVPa
13_1_40cm_scaffold_2194_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4300..4626)
DNA (327bp) protein (109aa)
Gas vesicle K n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ3_KORVE
gas vesicle K
Gas vesicle K {ECO:0000313|EMBL:ABF41407.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
13_1_40cm_scaffold_2194_6
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(4623..5300)
DNA (678bp) protein (226aa)
Gas vesicle synthesis protein n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NQ25_9ACTO
hypothetical protein Tax=CG_Anaero_02
13_1_40cm_scaffold_2194_7
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

Not on your lists

comp(5297..5485)
DNA (189bp) protein (63aa)
Putative uncharacterized protein id=1872768 bin=GWD2_Clostridiales_32_59 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
GvpA family gas vesicle protein Tax=GWD2_Clostridiales_32_59_curated
gas vesicle protein GvpA
13_1_40cm_scaffold_2194_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5482..6282)
DNA (801bp) protein (267aa)
gas vesicle protein n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI00035E4DC5
gas vesicle synthesis protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle synthesis protein
13_1_40cm_scaffold_2194_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6279..6605)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ9_KORVE
Gas vesicle G Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle G
13_1_40cm_scaffold_2194_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6610..7422)
DNA (813bp) protein (271aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
gas vesicle synthesis GvpLGvpF Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Gas vesicle synthesis GvpLGvpF
13_1_40cm_scaffold_2194_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7422..7670)
DNA (249bp) protein (83aa)
Fe-S cluster protector protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EU98_9BACT
Fe-S cluster protector protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Fe-S cluster protector protein
13_1_40cm_scaffold_2194_12
R_RIF_OD1_07_47_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(7675..7971)
DNA (297bp) protein (99aa)
Peptidase S24 S26A S26B and SEC7 domain containing protein n=1 Tax=Haemonchus contortus RepID=U6P6E9_HAECO
signal peptidase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_47_12_curated
nickel-type superoxide dismutase maturation protease
13_1_40cm_scaffold_2194_13
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8095..8532)
DNA (438bp) protein (146aa)
Superoxide dismutase, Ni {ECO:0000313|EMBL:EFC84900.1}; EC=1.15.1.1 {ECO:0000313|EMBL:EFC84900.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase, Ni n=1 Tax=Frankia sp. EUN1f RepID=D3CWN2_9ACTO
13_1_40cm_scaffold_2194_14
unknown

Not on your lists

comp(8577..8984)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_scaffold_2194_15
unknown

Not on your lists

10733..11173
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_scaffold_2194_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11023..11670)
DNA (648bp) protein (216aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DF29_9CHRO
hypothetical protein
13_1_40cm_scaffold_2194_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11667..12983)
DNA (1317bp) protein (439aa)
GTPase Der n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCZ9_THET1
small GTP-binding protein; K03977 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
small GTP-binding protein
13_1_40cm_scaffold_2194_18
unknown

Not on your lists

13007..14671
DNA (1665bp) protein (555aa)

This feature has no annotations

Displaying 19 items

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