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13_1_40cm_scaffold_3773

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3773_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2..1084
DNA (1083bp) protein (361aa)
His Kinase A (phosphoacceptor) domain protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Osmosensitive K+ channel signal transduction histidine kinase id=3034875 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
sensor protein KdpD
13_1_40cm_scaffold_3773_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1099..1749
DNA (651bp) protein (217aa)
two component transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative two-component system response regulator id=3034874 bin=GWC2_Chloroflexi_73_18 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
two component transcriptional regulator, winged helix family
13_1_40cm_scaffold_3773_3
unknown

Not on your lists

comp(1891..3084)
DNA (1194bp) protein (398aa)

This feature has no annotations

13_1_40cm_scaffold_3773_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

3390..3800
DNA (411bp) protein (137aa)
ACT domain-containing protein id=14631751 bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
ACT domain-containing protein Tax=CSP1_3_Armatimonadetes
ACT domain-containing protein
13_1_40cm_scaffold_3773_5
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3853..4869)
DNA (1017bp) protein (339aa)
Transmembrane transport protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HZ19_9PSEU
Transmembrane transport protein {ECO:0000313|EMBL:EOD65536.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmy
transmembrane transport protein
13_1_40cm_scaffold_3773_6
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4872..5741)
DNA (870bp) protein (290aa)
ABC transporter-like protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F504_VERMA
ABC transporter
ABC transporter-like protein {ECO:0000313|EMBL:AEB45493.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strai
13_1_40cm_scaffold_3773_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5725..6207)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000367874F
GntR family transcriptional regulator {ECO:0000313|EMBL:ETK37563.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp.
GntR family transcriptional regulator
13_1_40cm_scaffold_3773_8
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6340..8454)
DNA (2115bp) protein (705aa)
ABC transporter ATP-binding protein n=1 Tax=Salinispora pacifica RepID=UPI00036CF7A5
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABP55874.1}; Flags: Precursor;; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora trop
13_1_40cm_scaffold_3773_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8591..8905)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00035D17B6
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_3773_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(8907..9554)
DNA (648bp) protein (216aa)
thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase [EC:2.7.6.2] id=14629731 bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase [EC:2.7.6.2] Tax=CSP1_4_Chloroflexi
thiamine pyrophosphokinase
13_1_40cm_scaffold_3773_11
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9846..10988
DNA (1143bp) protein (381aa)
Ammonium transporter n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJT8_9CHLR
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source=
ammonium transporter
13_1_40cm_scaffold_3773_12
unknown

Not on your lists

10999..11112
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_scaffold_3773_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11186..11638)
DNA (453bp) protein (151aa)
transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI0003783977
Transcriptional regulator {ECO:0000313|EMBL:KGM30909.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus lim
activator of Hsp90 ATPase 1 family protein
13_1_40cm_scaffold_3773_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11613..11948)
DNA (336bp) protein (112aa)
Regulatory protein ArsR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKM7_PSEUX
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEA23234.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
13_1_40cm_scaffold_3773_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12251..13468
DNA (1218bp) protein (406aa)
glnA; glutamine synthetase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Glutamine synthetase id=2119349 bin=GWD2_Deltaproteobacteria_55_8 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glutamine synthetase, type I
13_1_40cm_scaffold_3773_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13490..13675
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_3773_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14810..15505
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3I7_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38804.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_scaffold_3773_18
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15502..16338)
DNA (837bp) protein (279aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V2L6_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL06911.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
arginase/agmatinase/formiminoglutamase
13_1_40cm_scaffold_3773_19
unknown

Not on your lists

comp(16394..16546)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_scaffold_3773_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(16602..17192)
DNA (591bp) protein (197aa)
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] id=16893872 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative aminotransferase (EC:2.6.1.-)
13_1_40cm_scaffold_3773_21
unknown

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comp(17739..18158)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_scaffold_3773_22
unknown

Not on your lists

18265..18438
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 22 items

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