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13_1_40cm_scaffold_4857

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4857_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1058
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003159160
ilvB; acetolactate synthase large subunit Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ilvB; acetolactate synthase large subunit
13_1_40cm_scaffold_4857_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1069..1791
DNA (723bp) protein (241aa)
Nicotinamidase-like amidase n=1 Tax=Herbaspirillum sp. CF444 RepID=J3D7I9_9BURK
Isochorismatase hydrolase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
isochorismatase hydrolase
13_1_40cm_scaffold_4857_3
unknown

Not on your lists

comp(1858..2109)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_scaffold_4857_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2133..2858)
DNA (726bp) protein (242aa)
class II aldolase/adducin family protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative class II aldolase/adducin-like protein id=1757971 bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus sp. NyZ101 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mtnB; methylthioribulose-1-phosphate dehydratase
13_1_40cm_scaffold_4857_5
unknown

Not on your lists

comp(2855..3400)
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_40cm_scaffold_4857_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3497..4495
DNA (999bp) protein (333aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=2119343 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_scaffold_4857_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4552..6720)
DNA (2169bp) protein (723aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
4-hydroxybenzoyl-CoA reductase alpha/gamma subunit (HcrC/hcrA) id=2069111 bin=GWD2_Deltaproteobacteria_55_8 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
oxidoreductase
13_1_40cm_scaffold_4857_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6717..7160)
DNA (444bp) protein (148aa)
carbon monoxide dehydrogenase subunit G Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Carbon monoxide dehydrogenase subunit G id=1757932 bin=GWD2_Deltaproteobacteria_55_8 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carbon monoxide dehydrogenase
13_1_40cm_scaffold_4857_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7157..8008)
DNA (852bp) protein (284aa)
hcrB; 4-hydroxybenzoyl-CoA reductase FAD-binding subunit B (EC:1.3.99.20); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003804D0C
4-hydroxybenzoyl-CoA reductase subunit beta
13_1_40cm_scaffold_4857_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8005..8457)
DNA (453bp) protein (151aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hcrC; 4-hydroxybenzoyl-CoA reductase, 2Fe-2S iron-sulfur cluster subunit C (EC:1.3.7.9)
(2Fe-2S)-binding domain protein id=1757936 bin=GWD2_Deltaproteobacteria_55_8 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_4857_11
Clostridia bacterium enrichment culture clone BF, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8454..9578)
DNA (1125bp) protein (375aa)
bclA; benzoate-CoA ligase BclA (EC:6.2.1.25)
Putative benzoate-CoA ligase BzlA (Fragment) n=1 Tax=Clostridia bacterium enrichment culture clone BF RepID=D8WWV4_9FIRM
Putative benzoate-CoA ligase BzlA {ECO:0000313|EMBL:ADJ94058.1}; Flags: Fragment;; TaxID=857391 species="Bacteria; Firmicutes; Clostridia; environmental samples.;" source="Clostridia bacterium enrichm
13_1_40cm_scaffold_4857_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9866..10585)
DNA (720bp) protein (240aa)
phenylacetic acid degradation protein paaA Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Probable phenylacetic acid degradation protein paaA id=2043722 bin=GWD2_Deltaproteobacteria_55_8 species=Chromobacterium violaceum genus=Chromobacterium taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phenylacetic acid degradation protein paaA
13_1_40cm_scaffold_4857_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10610..11137)
DNA (528bp) protein (176aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative uncharacterized protein id=2145520 bin=GWD2_Deltaproteobacteria_55_8 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_4857_14
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11164..11601)
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KIL37302.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
13_1_40cm_scaffold_4857_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11640..12494)
DNA (855bp) protein (285aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SXN0_9SYNE
nitrate/sulfonate/bicarbonate ABC transporter permease Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
nitrate/sulfonate/bicarbonate ABC transporter permease
13_1_40cm_scaffold_4857_16
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12491..13312)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI00037AA3E7
nitrate transporter protein CmpC; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
nitrate/sulfonate/bicarbonate ABC transporter ATPase
13_1_40cm_scaffold_4857_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13319..14023)
DNA (705bp) protein (235aa)
ubiD_R; UbiD-like subunit of potential (de) carboxylase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UbiD-like subunit of potential (De) carboxylase id=1904936 bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ubiD_R; UbiD-like subunit of potential (de) carboxylase
Displaying 17 items

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