ggKbase home page

13_1_40cm_scaffold_936

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_936_1
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..514
DNA (513bp) protein (171aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; An
GAF sensor signal transduction histidine kinase (EC:2.7.13.3)
GAF sensor signal transduction histidine kinase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFF1_ANAD2
13_1_40cm_scaffold_936_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(434..1474)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037E271C
Uncharacterized protein {ECO:0000313|EMBL:EFH80349.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_scaffold_936_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(1464..2315)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDZ5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH88368.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_scaffold_936_4
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(2312..3406)
DNA (1095bp) protein (365aa)
beta-glucosidase A (EC:3.2.1.21)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" s
Beta-glucosidase A n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L147_THERP
13_1_40cm_scaffold_936_5
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3403..3609)
DNA (207bp) protein (69aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae;
beta-galactosidase (EC:3.2.1.21)
Beta-glucosidase n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P7X7_9CAUL
13_1_40cm_scaffold_936_6
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(3606..4391)
DNA (786bp) protein (262aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZI8_THERP
short chain dehydrogenase/reductase family oxidoreductase
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:ACM04770.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source=
13_1_40cm_scaffold_936_7
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(4388..5548)
DNA (1161bp) protein (387aa)
galactonate dehydratase (EC:4.2.1.6)
Galactonate dehydratase {ECO:0000313|EMBL:ACM06891.1}; EC=4.2.1.6 {ECO:0000313|EMBL:ACM06891.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;"
Galactonate dehydratase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L477_THERP
13_1_40cm_scaffold_936_8
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5545..6381)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00036AD561
ABC transporter inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS04018.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" sour
13_1_40cm_scaffold_936_9
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(6384..7349)
DNA (966bp) protein (322aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WB30_KINRD
ABC transporter inner membrane protein Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
ABC transporter inner membrane protein
13_1_40cm_scaffold_936_10
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7349..8680)
DNA (1332bp) protein (444aa)
Extracellular solute-binding protein family 1 n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CBU9_STRBB
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADI04444.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces b
13_1_40cm_scaffold_936_11
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

8797..9834
DNA (1038bp) protein (346aa)
LacI family transcriptional regulator (EC:5.1.1.1); K02529 LacI family transcriptional regulator Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
Transcriptional regulator, LacI family n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM65_DESK7
LacI family transcriptional regulator
13_1_40cm_scaffold_936_12
unknown

Not on your lists

comp(10153..10335)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_scaffold_936_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10437..13676)
DNA (3240bp) protein (1080aa)
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7L1_SPHTD
diguanylate cyclase and metal dependent phosphohydrolase
Diguanylate cyclase and metal dependent phosphohydrolase {ECO:0000313|EMBL:ACZ37844.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaeroba
13_1_40cm_scaffold_936_14
unknown

Not on your lists

comp(13740..13874)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_scaffold_936_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14138..14308)
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_936_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14305..15102)
DNA (798bp) protein (266aa)
Succinate dehydrogenase subunit B (EC:1.3.5.1) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase subunit B id=4737577 bin=GWC2_Methylomirabilis_70_24 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_936_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15102..16256)
DNA (1155bp) protein (385aa)
Succinate dehydrogenase (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
sdhA; Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH12_9BACT
13_1_40cm_scaffold_936_18
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16253..16864)
DNA (612bp) protein (204aa)
sdhA; Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
sdhA; Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1) id=14626422 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Displaying 18 items

View Taxonomy