ggKbase home page

13_1_40cm_scaffold_955

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_955_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1..678
DNA (678bp) protein (226aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ribBA; riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LFH3_THEPS
13_1_40cm_scaffold_955_2
Corynebacterium pseudogenitalium, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(675..2321)
DNA (1647bp) protein (549aa)
Uncharacterized protein n=5 Tax=Corynebacterium RepID=U7KV06_9CORY
Cysteine-rich domain protein {ECO:0000313|EMBL:EFQ80550.1}; TaxID=525264 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium pseudogeni
hypothetical protein
13_1_40cm_scaffold_955_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2396..2920
DNA (525bp) protein (175aa)
6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BJB6_MEISD
hypothetical protein
13_1_40cm_scaffold_955_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2818..3717)
DNA (900bp) protein (300aa)
allophanate hydrolase n=1 Tax=Laceyella sacchari RepID=UPI0003B395AB
urea amidolyase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
urea amidolyase
13_1_40cm_scaffold_955_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3714..4193)
DNA (480bp) protein (160aa)
allophanate hydrolase subunit 1 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Urea amidolyase related protein id=1307297 bin=GWE1_Spirochaete_60_18 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
Allophanate hydrolase subunit 1
13_1_40cm_scaffold_955_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(4343..5098)
DNA (756bp) protein (252aa)
LamB/YcsF family protein; K07160 UPF0271 protein id=24433598 bin=RBG_19FT_COMBO_GAL15_69_19 species=Cellulomonas flavigena genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
LamB/YcsF family protein; K07160 UPF0271 protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
LamB/YcsF protein
13_1_40cm_scaffold_955_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5367..7382)
DNA (2016bp) protein (672aa)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=14628157 bin=bin8_Chloro species=unknown genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
13_1_40cm_scaffold_955_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7613..7894
DNA (282bp) protein (94aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_955_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7891..9330)
DNA (1440bp) protein (480aa)
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4W1_SPHTD
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
RNA polymerase sigma 54 subunit RpoN
13_1_40cm_scaffold_955_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9357..11126
DNA (1770bp) protein (590aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_955_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11127..11714
DNA (588bp) protein (196aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_955_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11711..13069
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000361D30F
proton-translocating NADH-quinone oxidoreductase, chain M Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
nuoM; putative NADH-ubiquinone oxidoreductase subunit M
13_1_40cm_scaffold_955_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13253..13720)
DNA (468bp) protein (156aa)
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Nucleoside diphosphate kinase id=4786775 bin=GWC2_Chloroflexi_73_18 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ndk; nucleoside diphosphate kinase
13_1_40cm_scaffold_955_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13717..14922)
DNA (1206bp) protein (402aa)
Processing protease n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZN6_THERP
processing protease Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
processing protease
13_1_40cm_scaffold_955_15
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(14983..15831)
DNA (849bp) protein (283aa)
Allergen V5/Tpx-1 family protein n=1 Tax=Salinispora pacifica RepID=UPI0003604AB7
SCP-like extracellular protein Tax=RBG_16_Chloroflexi_64_32_curated
Allergen V5/Tpx-1 family protein
13_1_40cm_scaffold_955_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15806..16756)
DNA (951bp) protein (317aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rub
Delta-aminolevulinic acid dehydratase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK5_RUBXD
13_1_40cm_scaffold_955_17
GWF2_OP11_44_15, Collierbacteria, Microgenomates, Bacteria

Not on your lists

16817..17911
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N6E4_ANATU
Uncharacterized protein {ECO:0000313|EMBL:KKT44261.1}; TaxID=1618404 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWF2_44_15.;"
hypothetical protein
Displaying 17 items

View Taxonomy