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13_1_40cm_scaffold_12741

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12741_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3..233)
DNA (231bp) protein (77aa)
FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] id=14631300 bin=bin9_gal15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
sarcosine oxidase subunit beta
13_1_40cm_scaffold_12741_trna_1
unknown

Not on your lists

304..385
DNA (82bp)
transferRNA
13_1_40cm_scaffold_12741_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(337..1008)
DNA (672bp) protein (224aa)
Intein-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Intein-containing protein id=1906307 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_12741_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1256..2890)
DNA (1635bp) protein (545aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C367_SPHTD
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
family 5 extracellular solute-binding protein
13_1_40cm_scaffold_12741_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2891..3115)
DNA (225bp) protein (75aa)
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
preprotein translocase subunit SecG
Preprotein translocase, SecG subunit id=4775469 bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_scaffold_12741_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3134..3841)
DNA (708bp) protein (236aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_12741_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3838..4452)
DNA (615bp) protein (205aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_12741_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4452..5186)
DNA (735bp) protein (245aa)
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4D1_SPHTD
13_1_40cm_scaffold_12741_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5183..5887)
DNA (705bp) protein (235aa)
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6X9_ANADF
phosphoglyceromutase
13_1_40cm_scaffold_12741_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5884..6627)
DNA (744bp) protein (248aa)
Triosephosphate isomerase (EC:5.3.1.1) Tax=RBG_16_RIF_CHLX_69_14_curated
Triosephosphate isomerase id=4775466 bin=GWC2_Chloroflexi_73_18 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
tpiA; triosephosphate isomerase
13_1_40cm_scaffold_12741_10
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6627..7520)
DNA (894bp) protein (298aa)
UPF0042 nucleotide-binding protein DESHY_110519 n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E7T3_9FIRM
Nucleotide-binding protein DESHY_110519 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfoto
hypothetical protein
13_1_40cm_scaffold_12741_11
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7502..7879)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q2H0_KRIFD
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADB35866.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (
13_1_40cm_scaffold_12741_12
unknown

Not on your lists

comp(7913..8323)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_scaffold_12741_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8324..9625)
DNA (1302bp) protein (434aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uncharacterized conserved secreted protein id=1699096 bin=GWB2_Chloroflexi_49_20 species=Idiomarina loihiensis genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
lipoprotein
13_1_40cm_scaffold_12741_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9622..10041)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YVG6_9CLOT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_12741_15
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10233..10856)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003793F4A
type 11 methyltransferase
Type 11 methyltransferase {ECO:0000313|EMBL:AGP53463.1}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5
13_1_40cm_scaffold_12741_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11065..12933)
DNA (1869bp) protein (623aa)
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UvrABC system protein C id=4775455 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
uvrC; excinuclease ABC subunit C
Displaying 17 items

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