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13_1_40cm_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 126 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_168_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3..476
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027V8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82699.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_scaffold_168_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(870..1145)
DNA (276bp) protein (92aa)
Drug resistance transporter EmrB/QacA subfamily n=1 Tax=Patulibacter medicamentivorans RepID=H0E276_9ACTN
major facilitator superfamily permease
Drug resistance transporter EmrB/QacA subfamily {ECO:0000313|EMBL:EHN12213.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;"
13_1_40cm_scaffold_168_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2653..3555
DNA (903bp) protein (301aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAH7_STRRD
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ89807.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="S
13_1_40cm_scaffold_168_4
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4152..4613)
DNA (462bp) protein (154aa)
DNA-3-methyladenine glycosylase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B2F92C
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KKA42026.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
DNA-3-methyladenine glycosylase I
13_1_40cm_scaffold_168_5
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4651..5037)
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EVR8_9NOCA
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AFU01667.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasil
13_1_40cm_scaffold_168_trna_1
unknown

Not on your lists

5162..5234
DNA (73bp)
transferRNA
13_1_40cm_scaffold_168_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

5268..5732
DNA (465bp) protein (155aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein id=24462126 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
metal-dependent hydrolase
13_1_40cm_scaffold_168_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

5735..7123
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000361AF49
peptidase M20 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
peptidase M20
13_1_40cm_scaffold_168_8
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(7112..7510)
DNA (399bp) protein (133aa)
hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
13_1_40cm_scaffold_168_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7722..8528
DNA (807bp) protein (269aa)
Kelch repeat type 1-containing protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZE64_9PROT
Kelch repeat type 1-containing protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Kelch repeat type 1-containing protein
13_1_40cm_scaffold_168_10
unknown

Not on your lists

comp(8495..8986)
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_40cm_scaffold_168_trna_3
unknown

Not on your lists

comp(9029..9118)
DNA (90bp)
transferRNA
13_1_40cm_scaffold_168_11
unknown

Not on your lists

9142..9276
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_scaffold_168_trna_2
unknown

Not on your lists

comp(9146..9221)
DNA (76bp)
transferRNA
13_1_40cm_scaffold_168_12
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

9333..10592
DNA (1260bp) protein (420aa)
Response regulator receiver protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTM1_ACEAZ
response regulator receiver protein; K02282 pilus assembly protein CpaE Tax=CG_CP02_01
response regulator receiver protein
13_1_40cm_scaffold_168_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10607..11569)
DNA (963bp) protein (321aa)
2-nitropropane dioxygenase NPD n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCK8_GEOOG
2-nitropropane dioxygenase NPD
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ADB76336.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obsc
13_1_40cm_scaffold_168_14
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11572..12960)
DNA (1389bp) protein (463aa)
Putative beta-lactamase class C penicillin binding protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDT2_METPP
beta-lactamase class C penicillin binding protein
Putative beta-lactamase class C penicillin binding protein {ECO:0000313|EMBL:ABM93721.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Me
13_1_40cm_scaffold_168_15
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

13028..13408
DNA (381bp) protein (127aa)
HesB/YadR/YfhF n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L061_THERP
HesB/YadR/YfhF
HesB/YadR/YfhF {ECO:0000313|EMBL:ACM06045.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 /
13_1_40cm_scaffold_168_16
unknown

Not on your lists

13371..13937
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_40cm_scaffold_168_17
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14044..15669)
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=7 Tax=Clostridium thermocellum RepID=CH60_CLOTH
chaperonin GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; HSP-60; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=203119 species="Bacteria; Firmicute
13_1_40cm_scaffold_168_18
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(15692..15937)
DNA (246bp) protein (82aa)
molecular chaperone GroES n=1 Tax=Coprothermobacter platensis RepID=UPI00037093B5
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=891968 speci
13_1_40cm_scaffold_168_19
unknown

Not on your lists

comp(16045..16263)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_168_20
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16263..17066)
DNA (804bp) protein (268aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DUF9_DESRL
metalloendopeptidase glycoprotease family
13_1_40cm_scaffold_168_21
unknown

Not on your lists

17112..17441
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_scaffold_168_22
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(17288..17896)
DNA (609bp) protein (203aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C284_SPHTD
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ACZ38351.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sp
13_1_40cm_scaffold_168_23
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17896..18480)
DNA (585bp) protein (195aa)
Protease, putative n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FM63_9RHOB
Peptidase M22 {ECO:0000313|EMBL:KDB04290.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;
inactive-like protein of metal-dependent proteases molecular chaperone
13_1_40cm_scaffold_168_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18477..18917)
DNA (441bp) protein (147aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein; K06925 UPF0079 ATP-binding protein id=24419642 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_scaffold_168_25
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18868..19767)
DNA (900bp) protein (300aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCJ1_9FIRM
thiamine-monophosphate kinase
13_1_40cm_scaffold_168_26
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19764..20303)
DNA (540bp) protein (180aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LIK7_METBM
13_1_40cm_scaffold_168_27
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20375..20593)
DNA (219bp) protein (73aa)
anti-sigma factor n=1 Tax=Brevibacterium linens RepID=UPI0000510519
Anti sigma-R factor, mycothiol system,RsrA {ECO:0000313|EMBL:KHS51846.1}; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linen
putative transmembrane anti-sigma factor
Displaying items 1-30 of 126 in total

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