ggKbase home page

13_1_40cm_scaffold_186

Search features with annotation key words

Displaying items 1-30 of 59 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_186_1
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(1..1380)
DNA (1380bp) protein (460aa)
von Willebrand factor type A (VWA) domain protein-like protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDB2_THET1
von Willebrand factor A
von Willebrand factor type A (VWA) domain protein-like protein {ECO:0000313|EMBL:ACZ42777.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP
13_1_40cm_scaffold_186_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1411..2121)
DNA (711bp) protein (237aa)
beta-lactamase id=14425170 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP
beta-lactamase Tax=CSP1_2_Dadabacteria
beta-lactamase-like protein
13_1_40cm_scaffold_186_3
unknown

Not on your lists

comp(2142..2777)
DNA (636bp) protein (212aa)

This feature has no annotations

13_1_40cm_scaffold_186_4
unknown

Not on your lists

comp(2795..3331)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_scaffold_186_5
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(3280..4260)
DNA (981bp) protein (327aa)
RuBisCO operon transcriptional regulator id=14629324 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
RuBisCO operon transcriptional regulator Tax=CSP1_4_Chloroflexi
RuBisCO operon transcriptional regulator
13_1_40cm_scaffold_186_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

4268..5083
DNA (816bp) protein (272aa)
Carboxyl transferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT85_RUBXD
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:ABG05393.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobact
13_1_40cm_scaffold_186_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

5121..5849
DNA (729bp) protein (243aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ACZ39435.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ACZ39435.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterinea
Propionyl-CoA carboxylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5B8_SPHTD
13_1_40cm_scaffold_186_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5914..7926)
DNA (2013bp) protein (671aa)
glycosyl hydrolase family protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Similar to glucoamylase id=1772125 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
glycosyl hydrolase family protein
13_1_40cm_scaffold_186_9
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8162..8578
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZ21_BEUC1
Metal-dependent hydrolase {ECO:0000313|EMBL:KGM15335.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JC
hypothetical protein
13_1_40cm_scaffold_186_10
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8720..9757)
DNA (1038bp) protein (346aa)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P3E9_9FIRM
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:EKP95565.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis;
alcohol dehydrogenase GroES domain-containing protein
13_1_40cm_scaffold_186_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

9790..10599
DNA (810bp) protein (270aa)
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
short-chain dehydrogenase/reductase SDR id=14626826 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR family protein
13_1_40cm_scaffold_186_12

Not on your lists

comp(10603..11253)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q097_9RHOO id=1241816 bin=RBG2 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S01H1_S08349 {ECO:0000313|EMBL:GAG07869.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_40cm_scaffold_186_13
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

11619..13901
DNA (2283bp) protein (761aa)
bse:Bsel_0658 adenylate/guanylate cyclase with CHASE sensor; K01768 adenylate cyclase [EC:4.6.1.1] id=1242875 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
adenylate/guanylate cyclase with Chase sensor; K01768 adenylate cyclase [EC:4.6.1.1] Tax=RBG_13_Chloroflexi_51_36_curated
adenylate cyclase (EC:4.6.1.1)
13_1_40cm_scaffold_186_14
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13903..15078)
DNA (1176bp) protein (392aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=GWB2_Elusimicrobia_63_22_curated
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003794399
protein kinase
13_1_40cm_scaffold_186_15
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15339..15749
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM51383.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
13_1_40cm_scaffold_186_16
unknown

Not on your lists

comp(15804..16085)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_scaffold_186_17
unknown

Not on your lists

comp(16057..16335)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_scaffold_186_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(16366..17286)
DNA (921bp) protein (307aa)
radical SAM protein id=24472254 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
radical SAM protein Tax=RBG_16_RIF_WS3X_71_46_curated
radical SAM protein
13_1_40cm_scaffold_186_19
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17422..18012)
DNA (591bp) protein (197aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1284664 species=
Endonuclease III n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3DE69_9ACTO
Endonuclease III
13_1_40cm_scaffold_186_20
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18110..18562)
DNA (453bp) protein (151aa)
GatB/YqeY domain-containing protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00037CD1CA
GatB/Yqey domain-containing protein
GatB/Yqey domain protein {ECO:0000313|EMBL:ADO73713.1}; GatB/Yqey family protein {ECO:0000313|EMBL:EAU66358.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cysto
13_1_40cm_scaffold_186_21
Erythranthe guttata, Erythranthe, Lamiales, asterids, Streptophyta, Viridiplantae

Not on your lists

18619..19398
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Anopheles darlingi RepID=E3X4F7_ANODA
Uncharacterized protein {ECO:0000313|EMBL:EYU44460.1}; TaxID=4155 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
3-oxoadipate enol-lactone hydrolase
13_1_40cm_scaffold_186_22
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19395..20300)
DNA (906bp) protein (302aa)
2-phospho-L-lactate transferase (EC:2.7.1.-)
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:ABG03925.1}; EC=2.7.1.- {ECO:0000313|EMBL:ABG03925.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrob
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXF3_RUBXD
13_1_40cm_scaffold_186_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20297..21034)
DNA (738bp) protein (246aa)
F420-dependent oxidoreductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5L7_CONWI
F420-dependent oxidoreductase
F420-dependent oxidoreductase {ECO:0000313|EMBL:ADB52566.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
13_1_40cm_scaffold_186_24
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(21031..21636)
DNA (606bp) protein (202aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDD2_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL54168.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
hypothetical protein
13_1_40cm_scaffold_186_25
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(21621..22625)
DNA (1005bp) protein (335aa)
F420-dependent oxidoreductase, G6PDH family {ECO:0000313|EMBL:EFH80988.1}; EC=1.5.98.2 {ECO:0000313|EMBL:EFH80988.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales;
F420-dependent oxidoreductase, G6PDH family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2M4_9CHLR
glucose-6-phosphate dehydrogenase
13_1_40cm_scaffold_186_26
unknown

Not on your lists

comp(22639..22824)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_scaffold_186_27
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

22845..23462
DNA (618bp) protein (206aa)
Putative bifunctional protein BirA: biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CXZ1_DEIDV
bifunctional biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase
Putative bifunctional protein BirA: biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ACO46947.2}; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinoc
13_1_40cm_scaffold_186_28
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(23445..24197)
DNA (753bp) protein (251aa)
NAD-dependent protein deacetylase {ECO:0000313|EMBL:AKG91710.1}; EC=3.5.1.- {ECO:0000313|EMBL:AKG91710.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobacea
NAD-dependent protein deacylase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KSK3_ARCVS
NAD-dependent deacetylase
13_1_40cm_scaffold_186_29
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

24219..25430
DNA (1212bp) protein (404aa)
major facilitator transporter id=14626407 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator transporter Tax=CSP1_6_Rokubacteria
major facilitator superfamily membrane protein
13_1_40cm_scaffold_186_30
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(25315..25908)
DNA (594bp) protein (198aa)
NUDIX hydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3M4_SPHTD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACZ38841.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphae
Displaying items 1-30 of 59 in total

View Taxonomy