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13_1_40cm_scaffold_1629

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1629_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2..622
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AYD7_KROS4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_1629_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


615..1634
DNA (1020bp) protein (340aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=TSAD_GEMAT
O-sialoglycoprotein endopeptidase
13_1_40cm_scaffold_1629_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1631..2488
DNA (858bp) protein (286aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A600_GEMAT
13_1_40cm_scaffold_1629_4
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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comp(2441..4300)
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003771BE8
Putative Iron permease FTR1, contains cytochrome c region {ECO:0000313|EMBL:CCQ91610.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source=
iron permease FTR1
13_1_40cm_scaffold_1629_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4260..4646)
DNA (387bp) protein (129aa)
holo-acyl-carrier-protein synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4''''-phosphopantetheinyl transferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3E97D
holo-acyl-carrier-protein synthase
13_1_40cm_scaffold_1629_6
unknown

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comp(4643..4981)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_scaffold_1629_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4954..5688)
DNA (735bp) protein (245aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1629_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5685..6266)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FEZ1_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90090.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1629_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6263..6964)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034C0CA3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_1629_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7025..8017)
DNA (993bp) protein (331aa)
NlpC/P60 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z3_GEMAT
NlpC/P60 family protein
NlpC/P60 family protein {ECO:0000313|EMBL:BAH37653.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_1629_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8010..8927)
DNA (918bp) protein (306aa)
Peptidase S58 DmpA n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G670_CHLAD
peptidase S58 DmpA Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase S58 DmpA
13_1_40cm_scaffold_1629_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8964..9578
DNA (615bp) protein (205aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
response regulator receiver
13_1_40cm_scaffold_1629_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9575..9757)
DNA (183bp) protein (61aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1629_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9789..11054)
DNA (1266bp) protein (422aa)
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMS4_9BACT
acetoacetate metabolism regulatory protein AtoC Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
13_1_40cm_scaffold_1629_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11047..11796)
DNA (750bp) protein (250aa)
Diacylglycerol kinase catalytic domain protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CZI8_9ACTO
diacylglycerol kinase catalytic subunit; K07029 Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_1629_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11866..15387)
DNA (3522bp) protein (1174aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z1_GEMAT
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF490
13_1_40cm_scaffold_1629_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15387..16130)
DNA (744bp) protein (248aa)
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_1629_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16131..18263)
DNA (2133bp) protein (711aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
surface antigen (D15)
13_1_40cm_scaffold_1629_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18289..19869
DNA (1581bp) protein (527aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y9_GEMAT
ABC-type transporter, periplasmic subunit
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1629_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19869..20786
DNA (918bp) protein (306aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90077.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1629_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20752..21219
DNA (468bp) protein (156aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZZ4_9GAMM
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
Displaying 21 items

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