ggKbase home page

13_1_40cm_scaffold_1870

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1870_1
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..408
DNA (408bp) protein (136aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRM2_ACCPU
integral membrane sensor signal transduction histidine kinase
13_1_40cm_scaffold_1870_2
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(654..1280)
DNA (627bp) protein (209aa)
TetR family transcriptional regulator n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5X079_MYCKA
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AGZ54582.1}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasi
13_1_40cm_scaffold_1870_3
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1409..2338
DNA (930bp) protein (310aa)
NmrA family transcriptional regulator n=1 Tax=Salinispora tropica RepID=UPI00035C2F31
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ABP54642.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-91
13_1_40cm_scaffold_1870_4
unknown

Not on your lists

2465..2836
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_scaffold_1870_5
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3103..3417)
DNA (315bp) protein (105aa)
Putative uncharacterized protein id=3024484 bin=GWC2_Pelobacter_58_13 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWC2_Pelobacteraceae_58_13_curated
hypothetical protein
13_1_40cm_scaffold_1870_6
Trypanosoma cruzi, Trypanosoma, Kinetoplastida, Eukaryota

Not on your lists

3513..4343
DNA (831bp) protein (277aa)
Mucin-associated surface protein (MASP), putative n=1 Tax=Trypanosoma cruzi (strain CL Brener) RepID=Q4DQS6_TRYCC
Mucin-associated surface protein (MASP), putative {ECO:0000313|EMBL:EAN94871.1}; TaxID=353153 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum.;" source="T
hypothetical protein
13_1_40cm_scaffold_1870_7
unknown

Not on your lists

4385..4669
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_1870_8
unknown

Not on your lists

comp(4692..5057)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_scaffold_1870_9
unknown

Not on your lists

5339..5491
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_scaffold_1870_10
unknown

Not on your lists

5974..6123
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_scaffold_1870_11
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6629..8767
DNA (2139bp) protein (713aa)
Di-heme cytochrome c peroxidase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVK5_HALH1
Di-heme cytochrome c peroxidase
Di-heme cytochrome c peroxidase {ECO:0000313|EMBL:AEE52462.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Halisco
13_1_40cm_scaffold_1870_12
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8913..14384
DNA (5472bp) protein (1824aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000345A579
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ADN13382.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 782
putative PAS/PAC sensor protein
13_1_40cm_scaffold_1870_13
unknown

Not on your lists

14553..14813
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_scaffold_1870_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14810..15460
DNA (651bp) protein (217aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF7_ANADF
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABS27803.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteracea
13_1_40cm_scaffold_1870_15
unknown

Not on your lists

15512..15658
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_scaffold_1870_16
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

15731..16003
DNA (273bp) protein (91aa)
alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=3879298 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peroxiredoxin
13_1_40cm_scaffold_1870_17

Not on your lists

16299..17054
DNA (756bp) protein (252aa)
Methyltransferase type 11 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UBQ0_METS4
Marine sediment metagenome DNA, contig: S01H1_S01584 {ECO:0000313|EMBL:GAF86697.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
type 11 methyltransferase
13_1_40cm_scaffold_1870_18
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(17375..18571)
DNA (1197bp) protein (399aa)
Serine (Or cysteine) proteinase inhibitor, clade B (Ovalbumin), member n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEN7_SORC5
serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member; K13963 serpin B Tax=RBG_13_Planctomycetes_46_10_curated
serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member
13_1_40cm_scaffold_1870_19
unknown

Not on your lists

19150..19653
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_40cm_scaffold_1870_20
unknown

Not on your lists

comp(20105..20575)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_scaffold_1870_21
unknown

Not on your lists

20626..20760
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_scaffold_1870_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21291..21446
DNA (156bp) protein (52aa)
glyoxalase n=1 Tax=Rhizobium phaseoli RepID=UPI000373AA3F
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACI55639.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
Displaying 22 items

View Taxonomy