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13_1_40cm_scaffold_1965

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1965_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3..629
DNA (627bp) protein (209aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glutamate racemase
Glutamate racemase id=3490282 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_scaffold_1965_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(545..1306)
DNA (762bp) protein (254aa)
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=RBG_16_Gemmatimonadetes_66_8_curated
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=7200380 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Calcineurin-like phosphoesterase superfamily domain protein
13_1_40cm_scaffold_1965_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1360..2550
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P851_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_scaffold_1965_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2585..3589
DNA (1005bp) protein (335aa)
Deoxyribose-phosphate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C7_GEMAT
deoxyribose-phosphate aldolase
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:AHG90560.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1965_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3589..5367
DNA (1779bp) protein (593aa)
aldehyde dehydrogenase n=1 Tax=Meiothermus timidus RepID=UPI00037A7618
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90561.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1965_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5471..5911
DNA (441bp) protein (147aa)
Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THL0_9CHLR
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90561.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1965_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5958..6326
DNA (369bp) protein (123aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYX8_9BACT
hypothetical protein
13_1_40cm_scaffold_1965_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6286..8337
DNA (2052bp) protein (684aa)
Peptidyl-prolyl cis-trans isomerase ppiA n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=J2AET0_9DELT id=5224324 bin=16ft_combo_ws3_JS1 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cyclophilin type peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
cyclophilin type peptidyl-prolyl cis-trans isomerase
13_1_40cm_scaffold_1965_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8334..11198
DNA (2865bp) protein (955aa)
Surface antigen (D15) n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRH5_9BACT
WD40 domain protein beta Propeller Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
WD40 domain protein beta Propeller
13_1_40cm_scaffold_1965_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11291..11923
DNA (633bp) protein (211aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_1965_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11901..12389
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Rare lipoprotein B
13_1_40cm_scaffold_1965_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12383..12751
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_1965_13
unknown

Not on your lists

comp(12676..12858)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_scaffold_1965_14
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12865..13221
DNA (357bp) protein (119aa)
RfaE bifunctional protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NI68_DESAR
rfaE bifunctional protein
RfaE bifunctional protein {ECO:0000313|EMBL:AEB09837.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca a
13_1_40cm_scaffold_1965_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


13218..13835
DNA (618bp) protein (206aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nucleoside-triphosphatase rdgB (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CP63_DESK7
13_1_40cm_scaffold_1965_trna_1
unknown

Not on your lists

13888..13961
DNA (74bp)
transferRNA
13_1_40cm_scaffold_1965_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14060..14650
DNA (591bp) protein (197aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH24_RHOM4
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG91764.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 17 items

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