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13_1_40cm_scaffold_3210

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3210_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1179)
DNA (1179bp) protein (393aa)
Putative cytochrome c id=4820597 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative cytochrome c Tax=GWA2_Rokubacteria_73_35_curated
putative cytochrome c
13_1_40cm_scaffold_3210_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1176..1955)
DNA (780bp) protein (260aa)
Putative (Diheme) protein id=4083690 bin=GWA2_Methylomirabilis_73_35 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_3210_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1952..2737)
DNA (786bp) protein (262aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Hypothetical (Diheme) protein id=4083692 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
heme-binding protein
13_1_40cm_scaffold_3210_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2724..4430)
DNA (1707bp) protein (569aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14429058 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_3210_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4430..5707)
DNA (1278bp) protein (426aa)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
radical SAM protein id=14429054 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
radical SAM protein
13_1_40cm_scaffold_3210_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5704..7971)
DNA (2268bp) protein (756aa)
universal stress protein UspA n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4FCA4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_3210_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7968..8375)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZDW7_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_scaffold_3210_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(8372..9055)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003720FAF
mrp; putative ATPase
Putative ATPase, Mrp homolog {ECO:0000313|EMBL:CBK40189.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_scaffold_3210_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9103..9591
DNA (489bp) protein (163aa)
Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM5_GEMAT
transcription elongation factor GreA/GreB domain-containing protein
Transcription elongation factor GreA/GreB domain-containing protein {ECO:0000313|EMBL:AHG87594.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_3210_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

9612..10283
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEK5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_40cm_scaffold_3210_11
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

10280..11029
DNA (750bp) protein (250aa)
type 11 methyltransferase Tax=RBG_16_Armatimonadetes_67_12_curated
methyltransferase type 11 id=14632043 bin=bin9_gal15 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
13_1_40cm_scaffold_3210_12
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(10974..12209)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C587F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
hypothetical protein
13_1_40cm_scaffold_3210_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12206..13096)
DNA (891bp) protein (297aa)
biotin carboxylase-like Tax=GWC2_Rokubacteria_70_16_curated
Biotin carboxylase-like protein id=4290030 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
biotin carboxylase-like
13_1_40cm_scaffold_3210_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13131..13418)
DNA (288bp) protein (96aa)
Putative D-ala D-ala ligase n=1 Tax=uncultured marine microorganism HF4000_ANIW137J11 RepID=B3T4R3_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_40cm_scaffold_3210_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13457..14065)
DNA (609bp) protein (203aa)
Nitrogen fixation protein NifU n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR6_9BACT
thioredoxin-like protein; K07400 Fe/S biogenesis protein NfuA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thioredoxin-like protein
13_1_40cm_scaffold_3210_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14052..16313)
DNA (2262bp) protein (754aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6EB3C
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
13_1_40cm_scaffold_3210_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16552..17007)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA76_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_3210_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17007..17549)
DNA (543bp) protein (181aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LU03_DESBD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13
13_1_40cm_scaffold_3210_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17546..18091)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor RpoE n=1 Tax=Schlesneria paludicola RepID=UPI00029A9387
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_scaffold_3210_20
unknown

Not on your lists

comp(18208..18297)
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_scaffold_3210_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18918..19997
DNA (1080bp) protein (360aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_3210_22
RLO_PLX_64_10, Bacteria

Not on your lists

20090..20563
DNA (474bp) protein (158aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
id=3479344 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
13_1_40cm_scaffold_3210_23

Not on your lists

comp(20656..22641)
DNA (1986bp) protein (662aa)
TonB-dependent receptor n=1 Tax=uncultured bacterium W5-51b RepID=H9BX72_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:AFD03394.1}; TaxID=1130999 species="Bacteria; environmental samples.;" source="uncultured bacterium W5-51b.;"
TonB-dependent receptor
13_1_40cm_scaffold_3210_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22647..23216)
DNA (570bp) protein (190aa)
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
TonB-dependent receptor plug
Putative uncharacterized protein id=8266420 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
13_1_40cm_scaffold_3210_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23229..23327)
DNA (99bp) protein (33aa)
bfeA; ferric enterobactin receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying 25 items

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