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13_1_40cm_scaffold_4169

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4169_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..209)
DNA (207bp) protein (69aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
Spermine/spermidine synthase-related protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74A88_GEOSL
spermine/spermidine synthase-like protein
13_1_40cm_scaffold_4169_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(199..2253)
DNA (2055bp) protein (685aa)
2-oxo acid dehydrogenase E1 component alpha/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-oxo acid dehydrogenase E1 component alpha/beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG2_GEMAT
2-oxo acid dehydrogenase E1 component alpha/beta subunit
13_1_40cm_scaffold_4169_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2379..2858
DNA (480bp) protein (160aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEF4_THET1
flavin reductase domain-containing FMN-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
flavin reductase domain-containing FMN-binding protein
13_1_40cm_scaffold_4169_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2855..4492)
DNA (1638bp) protein (546aa)
hypothetical protein; K07047 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidohydrolase 3
amidohydrolase 3; K07047 id=24396407 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_scaffold_4169_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4502..4765)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_4169_6
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4783..5313
DNA (531bp) protein (177aa)
Intracellular protease, PfpI family n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X3K0_DESRD
Pfpi family intracellular protease
Intracellular protease, PfpI family {ECO:0000313|EMBL:ACV68997.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" sourc
13_1_40cm_scaffold_4169_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5290..6531)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F366_CONWI
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_4169_8
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6557..6850
DNA (294bp) protein (98aa)
Predicted pyrophosphatase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZ60_PELTS
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:KJS15888.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
MazG; pyrophosphatase
13_1_40cm_scaffold_4169_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6856..7656)
DNA (801bp) protein (267aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GDD9_CHLAD
ribosome biogenesis GTPase RsgA
13_1_40cm_scaffold_4169_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7653..7955)
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_4169_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7937..8869)
DNA (933bp) protein (311aa)
putative proline dehydrogenase (EC:1.5.99.8)
Putative proline dehydrogenase {ECO:0000313|EMBL:BAH39895.1}; EC=1.5.5.2 {ECO:0000313|EMBL:BAH39895.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
Putative proline dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL8_GEMAT
13_1_40cm_scaffold_4169_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8869..11031)
DNA (2163bp) protein (721aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB30_ANASK
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_40cm_scaffold_4169_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11031..12290)
DNA (1260bp) protein (420aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_40cm_scaffold_4169_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12383..13981
DNA (1599bp) protein (533aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
13_1_40cm_scaffold_4169_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13971..15242)
DNA (1272bp) protein (424aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU23_ROSS1
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AHG87780.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_4169_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15479..16138
DNA (660bp) protein (220aa)
Putative cytochrome c n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z8_GEMAT
putative cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:BAH38708.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27
13_1_40cm_scaffold_4169_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16150..16809
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIZ7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
13_1_40cm_scaffold_4169_18
unknown

Not on your lists

16875..17282
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_scaffold_4169_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17279..18271)
DNA (993bp) protein (331aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_4169_20
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18268..19266)
DNA (999bp) protein (333aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
D-alanine--D-alanine ligase domain protein id=3103260 bin=GWC2_Planctomycetes_45_44 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
13_1_40cm_scaffold_4169_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19275..20264)
DNA (990bp) protein (330aa)
major facilitator family transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Membrane protein, major facilitator superfamily id=3080106 bin=GWF2_Geobacter_54_21 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
major facilitator transporter
Displaying 21 items

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