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13_1_40cm_scaffold_4397

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4397_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..409
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_4397_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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444..2087
DNA (1644bp) protein (548aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60BJ5_METCA
dolichyl-phosphate-mannose-protein mannosyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dolichyl-phosphate-mannose-protein mannosyltransferase
13_1_40cm_scaffold_4397_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2063..3868
DNA (1806bp) protein (602aa)
Asparagine synthetase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE87_SINAD
asparagine synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
asparagine synthase
13_1_40cm_scaffold_4397_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3865..4437
DNA (573bp) protein (191aa)
Metal dependent phosphohydrolase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJK6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metal dependent phosphohydrolase
13_1_40cm_scaffold_4397_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4434..5822
DNA (1389bp) protein (463aa)
Cardiolipin synthetase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSJ0_OPITP
phospholipase D/transphosphatidylase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cardiolipin synthetase
13_1_40cm_scaffold_4397_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5872..6426
DNA (555bp) protein (185aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_scaffold_4397_7
unknown

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6423..6770
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_scaffold_4397_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6786..7190
DNA (405bp) protein (135aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_4397_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7190..8479
DNA (1290bp) protein (430aa)
Putative outer membrane macrolide efflux protein n=2 Tax=Myxococcus RepID=Q1D4Q0_MYXXD id=5224473 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
outer membrane macrolide efflux protein Tax=RBG_16_RIF_WS3X_71_46_curated
outer membrane efflux protein
13_1_40cm_scaffold_4397_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8476..9219
DNA (744bp) protein (248aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter ATP-binding protein
13_1_40cm_scaffold_4397_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9243..10019
DNA (777bp) protein (259aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated
efflux transporter, RND family, MFP subunit
Displaying 11 items

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