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13_1_40cm_scaffold_4788

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4788_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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151..363
DNA (213bp) protein (71aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_4788_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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373..711
DNA (339bp) protein (113aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=GWC2_Gemmatimonadetes_71_10_curated
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
13_1_40cm_scaffold_4788_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(747..1277)
DNA (531bp) protein (177aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP5_GEMAT
thioredoxin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Redoxin domain protein
13_1_40cm_scaffold_4788_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1271..1966)
DNA (696bp) protein (232aa)
thiol--disulfide interchange protein; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Thiol--disulfide interchange protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP4_GEMAT
cytochrome c biogenesis protein transmembrane region
13_1_40cm_scaffold_4788_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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1995..2654
DNA (660bp) protein (220aa)
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
Oxidoreductase id=1921935 bin=GWB2_Clostridiales_37_7 species=Planococcus donghaensis genus=Planococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_4788_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2651..3094
DNA (444bp) protein (148aa)
Cytosine deaminase (EC:3.5.4.1)
Cytosine deaminase {ECO:0000313|EMBL:CDM24863.1}; EC=3.5.4.1 {ECO:0000313|EMBL:CDM24863.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste
CMP/dCMP deaminase, zinc-binding protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G933_GEOUR
13_1_40cm_scaffold_4788_7
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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3155..4468
DNA (1314bp) protein (438aa)
M20 family peptidase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0J2_9PROT
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:KER10223.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source=
amidohydrolase
13_1_40cm_scaffold_4788_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4465..4842
DNA (378bp) protein (126aa)
RNA-binding S4 domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F693_CONWI
RNA-binding S4 domain-containing protein
RNA-binding S4 domain protein {ECO:0000313|EMBL:ADB48766.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
13_1_40cm_scaffold_4788_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4825..5904)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAU0_GEMAT
protein of unknown function DUF4098
Uncharacterized protein {ECO:0000313|EMBL:AHG92024.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_4788_10
Prevotella marshii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5973..6413
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HN50_9BACT
Nodulation efficiency protein D {ECO:0000313|EMBL:EFM02404.1}; TaxID=862515 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella marshii DSM 1
membrane protein
13_1_40cm_scaffold_4788_11
Caldithrix abyssi, Caldithrix, Bacteria

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6417..7358
DNA (942bp) protein (314aa)
Band 7 protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTR7_9BACT
Band 7 protein {ECO:0000313|EMBL:EHO42684.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
13_1_40cm_scaffold_4788_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

7355..8404
DNA (1050bp) protein (350aa)
butyryl-CoA dehydrogenase; K00248 butyryl-CoA dehydrogenase [EC:1.3.8.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXQ0_9BACT
13_1_40cm_scaffold_4788_13
unknown

Not on your lists

8460..8747
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_scaffold_4788_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8756..12466)
DNA (3711bp) protein (1237aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37785.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_4788_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12526..13677
DNA (1152bp) protein (384aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7); K10907 aminotransferase [EC:2.6.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase (EC:2.6.1.-) id=24561144 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aminotransferase class I and II
13_1_40cm_scaffold_4788_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13674..14360)
DNA (687bp) protein (229aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
Displaying 16 items

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