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13_1_40cm_scaffold_5560

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5560_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2..898)
DNA (897bp) protein (299aa)
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT
mfd; transcription-repair coupling factor
13_1_40cm_scaffold_5560_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(898..2667)
DNA (1770bp) protein (590aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L4_GEMAT
double-transmembrane region domain protein
Double-transmembrane region domain protein {ECO:0000313|EMBL:AHG91285.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_5560_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2664..3473)
DNA (810bp) protein (270aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF58
Putative uncharacterized protein id=4613995 bin=GWF2_Lentisphaerae_49_21 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
13_1_40cm_scaffold_5560_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3596..4978
DNA (1383bp) protein (461aa)
GF13555 gene product from transcript GF13555-RA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PEGA domain protein id=24407688 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
integral membrane protein
13_1_40cm_scaffold_5560_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5069..6565
DNA (1497bp) protein (499aa)
peptidase M28 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Aminopeptidase id=3410210 bin=GWA2_Ignavibacteria_55_11 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative aminopeptidase
13_1_40cm_scaffold_5560_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6641..7312
DNA (672bp) protein (224aa)
transcriptional regulator n=1 Tax=Caldimonas manganoxidans RepID=UPI00037EE44B
transcriptional regulator domain-containing protein
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:AHG89496.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_5560_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7309..8556
DNA (1248bp) protein (416aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NLT5_9FIRM
ATP-binding region ATPase domain protein
13_1_40cm_scaffold_5560_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8592..10754
DNA (2163bp) protein (721aa)
Heavy metal resistance protein CzcB n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09BI9_STIAD
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89498.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 8 items

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