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13_1_40cm_scaffold_791

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_791_1
unknown

Not on your lists

comp(3..239)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_scaffold_791_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(236..922)
DNA (687bp) protein (229aa)
glcD; glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycolate oxidase subunit GlcD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT
glcD; glycolate oxidase subunit GlcD
13_1_40cm_scaffold_791_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1762..2655)
DNA (894bp) protein (298aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor
13_1_40cm_scaffold_791_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2933..4036)
DNA (1104bp) protein (368aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-dehydroquinate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y5_GEMAT
3-dehydroquinate synthase
13_1_40cm_scaffold_791_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4033..4482)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37646.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_791_6
unknown

Not on your lists

comp(4597..5481)
DNA (885bp) protein (295aa)

This feature has no annotations

13_1_40cm_scaffold_791_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5497..6519
DNA (1023bp) protein (341aa)
putative oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Ferredoxin--NADP reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y7_GEMAT
Ferredoxin--NADP reductase
13_1_40cm_scaffold_791_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6516..8027)
DNA (1512bp) protein (504aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJV1_RHOM4
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase
13_1_40cm_scaffold_791_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7993..8913)
DNA (921bp) protein (307aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90077.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_791_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8894..10492)
DNA (1599bp) protein (533aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y9_GEMAT
ABC-type transporter, periplasmic subunit
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_791_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10593..12665
DNA (2073bp) protein (691aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
surface antigen (D15)
13_1_40cm_scaffold_791_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12666..15194
DNA (2529bp) protein (843aa)
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_791_13
unknown

Not on your lists

comp(15258..15416)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_scaffold_791_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15456..16940
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z1_GEMAT
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF490
13_1_40cm_scaffold_791_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16941..17861
DNA (921bp) protein (307aa)
Diacylglycerol kinase catalytic region n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLF9_ROSCS
diacylglycerol kinase catalytic subunit; K07029 Tax=RBG_16_Gemmatimonadetes_66_8_curated
diacylglycerol kinase catalytic subunit
13_1_40cm_scaffold_791_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17854..19197
DNA (1344bp) protein (448aa)
acetoacetate metabolism regulatory protein AtoC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=4948364 bin=GWC2_Nitrospirae_57_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
13_1_40cm_scaffold_791_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19221..19403
DNA (183bp) protein (61aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_791_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19400..20032)
DNA (633bp) protein (211aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
response regulator receiver
13_1_40cm_scaffold_791_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20069..21007
DNA (939bp) protein (313aa)
Peptidase S58 DmpA n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQB0_ROSCS
peptidase S58 DmpA Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase S58 DmpA
13_1_40cm_scaffold_791_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21000..21989
DNA (990bp) protein (330aa)
NlpC/P60 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z3_GEMAT
NlpC/P60 family protein
NlpC/P60 family protein {ECO:0000313|EMBL:BAH37653.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_791_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22007..22708
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034C0CA3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_791_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22705..23286
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FEZ1_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90090.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_791_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23283..24029
DNA (747bp) protein (249aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_791_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24002..25303
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00035FB7FF
carboxypeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
carboxypeptidase
Displaying 24 items

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