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13_1_40cm_scaffold_3080

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3080_1
unknown

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comp(3..134)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_scaffold_3080_2
unknown

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637..1002
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_scaffold_3080_trna_1
unknown

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comp(1359..1432)
DNA (74bp)
transferRNA
13_1_40cm_scaffold_3080_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1447..1695)
DNA (249bp) protein (83aa)
conserved hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_3080_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1744..3417)
DNA (1674bp) protein (558aa)
GTP-binding protein TypA n=4 Tax=Bacteria RepID=C1A9K9_GEMAT
typA; GTP-binding protein TypA; K06207 GTP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
GTP-binding protein TypA
13_1_40cm_scaffold_3080_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(3617..4510)
DNA (894bp) protein (298aa)
Zinc transporter ZitB n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L337_THERP
zinc transporter ZitB
Zinc transporter ZitB {ECO:0000313|EMBL:ACM06419.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC
13_1_40cm_scaffold_3080_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4927..6003
DNA (1077bp) protein (359aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X1_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF21
13_1_40cm_scaffold_3080_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6000..6926)
DNA (927bp) protein (309aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L0_GEMAT
4-hydroxythreonine-4-phosphate dehydrogenase
13_1_40cm_scaffold_3080_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6932..8263)
DNA (1332bp) protein (444aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L1_GEMAT
SurA domain-containing protein
13_1_40cm_scaffold_3080_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8265..9728)
DNA (1464bp) protein (488aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L2_GEMAT
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_scaffold_3080_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9737..12967)
DNA (3231bp) protein (1077aa)
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT
transcription-repair coupling factor
13_1_40cm_scaffold_3080_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12967..14709)
DNA (1743bp) protein (581aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
13_1_40cm_scaffold_3080_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14706..15590)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF58
13_1_40cm_scaffold_3080_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15748..17028
DNA (1281bp) protein (427aa)
membrane protein n=1 Tax=Streptomyces somaliensis RepID=UPI00029A0E61
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_3080_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17054..18118)
DNA (1065bp) protein (355aa)
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT
transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcription termination factor
13_1_40cm_scaffold_3080_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18229..19659
DNA (1431bp) protein (477aa)
Elongation factor 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L7_GEMAT
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lepA; GTP-binding protein LepA
Displaying 16 items

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