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13_1_40cm_scaffold_9435

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_9435_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3..785)
DNA (783bp) protein (261aa)
Protein kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAK8_ANADF
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
adenylate class-3/4/guanylyl cyclase
13_1_40cm_scaffold_9435_2
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(888..1526)
DNA (639bp) protein (213aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B091_HERA2
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ABX05200.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosip
13_1_40cm_scaffold_9435_3
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(1696..2103)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AA47_9BACT
transmembrane_regions 17..39 Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
13_1_40cm_scaffold_9435_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2120..2977
DNA (858bp) protein (286aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFU4_CHLTF
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator Tax=RBG_13_Deltaproteobacteria_52_11_curated
response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
13_1_40cm_scaffold_9435_5
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2971..3222
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6HB09_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJE24601.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
13_1_40cm_scaffold_9435_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3238..4818
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL9_GEMAT
peptidase M14 carboxypeptidase A
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:AHG92073.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_9435_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4834..6156
DNA (1323bp) protein (441aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QJ7_SOLUE
amino acid permease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid permease-associated region
13_1_40cm_scaffold_9435_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6160..7140
DNA (981bp) protein (327aa)
Amidohydrolase 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QJ8_SOLUE
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG89013.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_9435_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7115..7789
DNA (675bp) protein (225aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC16_GEMAT
protein kinase
13_1_40cm_scaffold_9435_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7728..8702
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9F4_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_9435_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8917..9516
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV59_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDY22447.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_scaffold_9435_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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9522..10070
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV59_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
13_1_40cm_scaffold_9435_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10170..12023
DNA (1854bp) protein (618aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
13_1_40cm_scaffold_9435_14
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

12026..12856
DNA (831bp) protein (277aa)
Two-component hybrid sensor and regulator n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EQ6_BRADU
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
two-component hybrid sensor and regulator
Displaying 14 items

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